Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00826 ATGCACTCTTGTGTGAAACAATTGGAAGAACATTTAGATCTGGGTGCAAATGAAGATGTTCGAGTAGTAGGAATTTATGGGATGGGTGGAATAGGAAAGACCACACTTGCTACAGCACTGTTTCATAAAATCTCTCCTCAATATGATGCTTGTTGTTACATTGATGATGTAAGTAAAATTTACAGGGATTTTGGACCAGTGAGTTTGCAAAAACAACTCCTTTGTCAAACTCTAAACCAACGTAATATGGAGATACATAATATTTCCCAGGGCATCATGATGGAAAGAAGTAGGTTATCTCACTTGAAGGCACTTATTATTCTTGATAATGTTGACCAACTTGAACAACTTGAAAAATTGGCTTTACTACCTACGCACCTAGGTGCAGGGAGTAGAGTTGTCATAATCTCTAGAGATAGTCATATCTTAAGAAATCATAAAGTGGAAGCAATTTACAATGTTATCCTTATATGTGTTCTCATTCTTATTCAAGATGTGAGACTTAACTCACACTTGGCATTAGGTTATCCTTACATGTGTTCTCATTCTTACTCAAGATGCCTTGAAGCACTGAAGTATGTTGATGGCCTTCCATTAGCAGCTGAATTATTGGGCTTCTTTTTATTTGATAGAGATGTTTGTGAGTGGAGAAGTGCGTTGGTTAGACTGAAACAAAATCCAAGGAAAGATATCATGGATGTGTTACGAATAAGTTTTGATGGATTGGAGGAAATGGAGAAAGAACTATATTTAGATATCGCCTGTTTTTCTTCTTCTTTCAATGATTTATTGGAGAAAATAACAATGACAGGACTTTTGGAGTATAGAGGATTTTGTACTGATGTTGGTTTAAAAGTTCTGAATGAGAAATCACCCATAAGCTATGAGGGTTCGGCTATAAAGATGCACGACTTGTTGAAAGAGCTGGGAGAGAGCATTGAAGCCAAAAACCTTGAAGCCGTAGTCGTTAAATATTATCCAAGTGCCCAAGTTGAGCGAGATGGAAAACTATACTTCAAATCCTCTCAAGAATCCTTAGTTATGAGTATTGTTATTCCTGGAACTGAAATTCCAAGGTGGTTCATTAAGCAAAATGTGGGTAGTTCAGTAAGACTGGAGTTGTATCCCCTGATGGATGACCCAAATTGGATAGGTGTTGCTTGTTTTGAAGAACTAAGTGGATGGATAAATGAAGATTTTGCTCTTCATGAACTTGTATTCACACATCCCACTACCAAGACTTCCTGTTCAGCTTTGATTTTGTTGGTCAAAGGTTGTGGGTATCGTTATCTATTCGAGGAGGATATTCAACCACTCAAATCAAACATCATCTTCACTGCAACGTCCTCTTCTGGGAAACCCAAACTATTAACAAACTGA 1380 0.3732 MHSCVKQLEEHLDLGANEDVRVVGIYGMGGIGKTTLATALFHKISPQYDACCYIDDVSKIYRDFGPVSLQKQLLCQTLNQRNMEIHNISQGIMMERSRLSHLKALIILDNVDQLEQLEKLALLPTHLGAGSRVVIISRDSHILRNHKVEAIYNVILICVLILIQDVRLNSHLALGYPYMCSHSYSRCLEALKYVDGLPLAAELLGFFLFDRDVCEWRSALVRLKQNPRKDIMDVLRISFDGLEEMEKELYLDIACFSSSFNDLLEKITMTGLLEYRGFCTDVGLKVLNEKSPISYEGSAIKMHDLLKELGESIEAKNLEAVVVKYYPSAQVERDGKLYFKSSQESLVMSIVIPGTEIPRWFIKQNVGSSVRLELYPLMDDPNWIGVACFEELSGWINEDFALHELVFTHPTTKTSCSALILLVKGCGYRYLFEEDIQPLKSNIIFTATSSSGKPKLLTN 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00826 459 Gene3D - 1 152 IPR027417 -
Spst11g00826 459 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 313 IPR044974 GO:0006952
Spst11g00826 459 Pfam NB-ARC domain 5 229 IPR002182 GO:0043531
Spst11g00826 459 PRINTS Disease resistance protein signature 194 208 - -
Spst11g00826 459 PRINTS Disease resistance protein signature 22 37 - -
Spst11g00826 459 PRINTS Disease resistance protein signature 98 112 - -
Spst11g00826 459 Gene3D - 181 243 IPR042197 -
Spst11g00826 459 SMART AAA_5 19 162 IPR003593 GO:0016887
Spst11g00826 459 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 253 IPR027417 -
Spst11g00826 459 SUPERFAMILY "Winged helix" DNA-binding domain 230 316 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00826 Spst-Chr11 32428033 32431085 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00826 19 313 WRKY Transcription Factor Family AT5G45050 31.699 3.51e-33 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00826 - - ccaj:109792038 366.311