Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00825 ATGGCTTGCAGACAAATTCAACGCAGCTCTTCATCACGAACGAAGAATTTTGACGTGTTTGTTAGCTTTAGAAGTGATACTCGTAACGGTTTTACTGATCACCTTTTTGCTGCTCTTCAGAGAAAAGATGTTCTGGCCTTCAGAGACGACCAAACAATAAAAAAAGGGGAATTCTTGGAGTCTGAGCTCTTGCGCGCAATTGAAGGGTCACGAGTTTTCATTGTTGTCTTCTCGAAGGACTATGCATCATCCACATGGTGCATGAAAGAGCTTACGAAGATCGTGGAAACAGGTCGAAGTTTGCTCCCTATTTTCTATGATGTCACTCCTTCGGAGGTCCGAAAACAGAGTGGAGAGTTTGCAGAAGCTTTTGCTCAACACGAAGAAAGGTTCAAAGATGACTTGGAAATGCTACAAAAATGGAGGGAAGCGCTCAAAACAAGTGCCGATCGTTGTGGGTGGGATATGCAAAATAAGCAACAAAATGAAGAAATCGAAAACATTGTTGAAGAGGTAATCAACATATTGGGTTATAATCAAATTTTGAGTTTTGGAGATGATTTAGTTGATATGCATTCTCGCGTTAAACAATTGGAAGAACTTCTGGATTTGGGTGCAAATGATGTTGTTGGGCTTGTGGGAATTTGGAAGAAACTTCTAGACTATCGAGAATTTTATCCTGACATTGGTATGAAAGTTCTGATTGAGAAATCACTTATTAGTTGTCGAGATGGGGAGATTCAAATGCATGACTTGTTGCAAGAGTTGGGGAAGAGTATTGTCAGAGAAGAAGCACCCAAGGAACCAAGAAAGTGGAGCAGGTTATGGGACTACAAGGATCTCCAAAAAGCCATGAAAATAAATACGGAAGCCAAAAATCTTGAAGCTATAGTTATTGAACAACGTCCAGAAGAGTTTGTACAAGAAAGAATAAGAGTGGATGCTCTATCAAAAATTAATCACCTTCAATTGCTCATTCTTAAGAAAGTGAACACTTTTGGATCTCTGAATTGTATTTCTAATGAACTGAGGTATCTGAATTGGGATAACTTTCCTTTCGTGTCTTTGCCATCAACTTTCGAGCCAGATCAACTTGTAGAATTGCAACTGCGTTATAGCAATATCAAGAAATTATGGGAAGGCACAAAGATCCTGCCTAAGTTGAGAACTCTGGATCTCTGTCACTCCAAAAATCTTATTGAGATGCCAGACTTAACAGGGGTTCCTCATCTTACGAGTCTTCGACTTAAAGGATGTATAGAACTTGTCCAGATAGATCCATCCATTGGTATTCTAAGAGAACTTATTCATCTGGATTTGAAAAATTGTAAAAATCTTGTCCTTAATCTAAATATTATTTTTGGGCTCGGTTCTCTAAGAGGCTTAAATCTCTCTGGATGTTCAAAATTACTGAATAGTAAGATGTTAATGGAGCCAAGAGACACACAACATTTGGAAAAAGTTGATAAAAATACAAGTGTCGTCCAACGGTCAACATCCTCTGTATACAAACTTCTAATATTGCCTTTCAATTTTCTATCCTCTCCAAAACCTGAAGATTCCCTTGGTTTGTTGTTACCTTATTTATCTCGTTTCCAATGTTTGTCACATCTTGATCTGAGCTTTTGCAATCTACTCCAAATCCCTGATGCAATCGGGAACTTACATTCTTTAGTTGGACTAAATTTAGGAGGAAACAAATTTGTGACACTACCTTGTACCATCAAGCAACTTTCCAAACTTGAAAGGTTGAACTTGGAGCACTGCAAGAAACTAAAATATTTCCCCGAGCTTCCAATAACAAAAGACATAACAATTGGCAAATATTGGTGGAGATTATACCTTTTTTACTGCCCCAGTTTGAGTGATATAGAACACTGTTATAGAATGGTTACTTCTTGGATGACGCAAAATCTTGAGGTTTACTTGCAACGAACTATCTCCTCTGCTATGATGGAAATTGTTATTCCTGGGTCTCAAATTCCAAAGTGGTTTAATAAACAAAATGCTCGTAGTTCAATAAGTGTGGATCTATCTTCTGTTATGGATGATCCAAATTGGATAGGTGTTGCCTTTTGTGTACTATTTATCACACACGAAGATCCTACAAATTTGAGTGACGGAAGGAATCATCATGACGATTGTATTGCATACGGTGTCCATAATAAACACCTTTGGCCAAAACGTTATATACATGTTCCAATATATTTCGAGAAAGATCTGGTGACAGTTGAATTAGATCACTTGTTTACAGTGTTTTACTCTCGGGAAGAATTCATCGGTCTTCTTACTCAAGATCCAGACAAAATGCTTGATCCTGCTAAGTTGGAATTCGAAATTATTTCTGATCATTTTCAAGGTTTACGTGTTGTGCTATTCTGGGGACCAGGTGGTTATTCTCATCTTTTAGTTTTATCTGAATACGAAGAAAGGTTGAAAGATGATATGGAAATGGTACACAAATGGAGAGATGCATTGAAAGCAATTACCAATCGTTATGGGTGGGATGTACAAAATAAGTAA 2523 0.3769 MACRQIQRSSSSRTKNFDVFVSFRSDTRNGFTDHLFAALQRKDVLAFRDDQTIKKGEFLESELLRAIEGSRVFIVVFSKDYASSTWCMKELTKIVETGRSLLPIFYDVTPSEVRKQSGEFAEAFAQHEERFKDDLEMLQKWREALKTSADRCGWDMQNKQQNEEIENIVEEVINILGYNQILSFGDDLVDMHSRVKQLEELLDLGANDVVGLVGIWKKLLDYREFYPDIGMKVLIEKSLISCRDGEIQMHDLLQELGKSIVREEAPKEPRKWSRLWDYKDLQKAMKINTEAKNLEAIVIEQRPEEFVQERIRVDALSKINHLQLLILKKVNTFGSLNCISNELRYLNWDNFPFVSLPSTFEPDQLVELQLRYSNIKKLWEGTKILPKLRTLDLCHSKNLIEMPDLTGVPHLTSLRLKGCIELVQIDPSIGILRELIHLDLKNCKNLVLNLNIIFGLGSLRGLNLSGCSKLLNSKMLMEPRDTQHLEKVDKNTSVVQRSTSSVYKLLILPFNFLSSPKPEDSLGLLLPYLSRFQCLSHLDLSFCNLLQIPDAIGNLHSLVGLNLGGNKFVTLPCTIKQLSKLERLNLEHCKKLKYFPELPITKDITIGKYWWRLYLFYCPSLSDIEHCYRMVTSWMTQNLEVYLQRTISSAMMEIVIPGSQIPKWFNKQNARSSISVDLSSVMDDPNWIGVAFCVLFITHEDPTNLSDGRNHHDDCIAYGVHNKHLWPKRYIHVPIYFEKDLVTVELDHLFTVFYSREEFIGLLTQDPDKMLDPAKLEFEIISDHFQGLRVVLFWGPGGYSHLLVLSEYEERLKDDMEMVHKWRDALKAITNRYGWDVQNK 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00825 840 ProSiteProfiles TIR domain profile. 15 176 IPR000157 GO:0007165
Spst11g00825 840 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 154 IPR035897 -
Spst11g00825 840 Gene3D Ribonuclease Inhibitor 497 661 IPR032675 -
Spst11g00825 840 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 523 598 IPR044974 GO:0006952
Spst11g00825 840 Gene3D Ribonuclease Inhibitor 180 489 IPR032675 -
Spst11g00825 840 SMART till_3 16 151 IPR000157 GO:0007165
Spst11g00825 840 Gene3D - 10 179 IPR035897 -
Spst11g00825 840 Pfam TIR domain 17 172 IPR000157 GO:0007165
Spst11g00825 840 Pfam C-JID domain 656 755 IPR045344 -
Spst11g00825 840 SUPERFAMILY L domain-like 248 634 - -
Spst11g00825 840 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 177 - -
Spst11g00825 840 Pfam Leucine Rich Repeat 364 383 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00825 Spst-Chr11 32423253 32427826 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00825 218 599 WRKY Transcription Factor Family AT5G45050 29.730 3.89e-33 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00825 - - vun:114169377 759.599