Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00823 ATGGCTTGCAGACAAATTCAACGCAGCTCTTCATCACGAACGAAGAATTTTGACGTGTTTGTTAGCTTTAGAGGTGATACTCGTAACGGTTTTACTGATCACCTTTTTGCTGCTCTTCAGAGAAAAGATGTTCTGGCCTTCAGAGACGACCAAACAATAAAAAAAGGGGAATTCTTGGAGTCTGAGCTCTTGCGCGCAATTGAAGGGTCACGAGTTTTCATTGTTGTCTTCTCGAAGGACTATGCATCATCCACATGGTGCATGAAAGAGCTTACGAAGATCGTGGAAACAGGTCGAAGTTTGCTCCCTATCTTCTATGATGTCACTCCTTCTGAGGTCCGAAAACAGAGTGGAGAGTTTGCAGAAGCTTTTGCTCAACACGAAGAAAGGTTCAAAGATGACTTGGAAATGCTAAAAAAATGGAGGGAAGCGCTCAAAACAAGTGCCGATCGTTGTGGGTGGGATATACAAAATAAGCAACAAAATGAAGAAATCGAAAACATTGTTGAAGAGGTAATCAACATATTGGGTTATAATCAAATTTTGAGTTTTGGAGATGATTTTGTTGATATGCATTCTCGTGTTAAAAAATTGGAAGAATTTCTGGATTTGGGTGCAAATGATGTTGTTGGGCTTGTGGGAATTCGTGGGATGGTGAAGAAACTTCTAGACTATCGAGAATTTTATCCTGACATTGGTATGAAAGTTCTGATTGAGAAATCACTTATTAGTTGTCGAGATGGGGAGATTCAAATGCATGACTTGTTGCAAGAGTTGGGGAAGAGTATTGTCAGAGAAGAAGCACCCAAGGAACCAAGAAAGTGGAGCAGGTTATGGGACTACAAGGATCTCCAAAAAGCCATGAAAATAAATACGGAAGCCAAAAATCTTGAAGCTATAGTTATTGAACAACGTCCAGAAGAGTTTCTACAAGAAAGAATAAGAGTGGATGCTCTGTCAAAAATTAATCACCTTGAATTGCTCATACTTCAGAATGTGAACACTTTTGGATCTCTGAATTGTATTTCTAATGAACTGAGGTATCTGAATTGGGATAACTTTCCTTTCGTGTCTTTGCCATCAACTTTCGAGCCAGATCAACTTGTAGAATTGCAACTGCGTTATAGCAATATCAAGAAATTATGGGAAGGCACAAAGATGCCAGACTTAACAGGGGTTCCTCATCTTACGAGTCTTCTACTAGAAGGATGTATAGAACTTGTCCAGATAGATCCATCCATTGGTATTCTAAGAGAACTTATTGATCTGGATTTGAAAAATTGTAAAAATCTTGTCCTTAATCTGAATATTATTTTTGGGCTCGGTTCTCTAAGAAGCTTAAATCTCTCTGGATGTTCAAAATTACTGAATAGTAAGATGTTAATGGAGCCAAGAGACACACAACATTTGGAAAAAGTTGATAAAAATACAAGTGTCGTCCAACGGTCAACATCCTCTGTATACAAACTTCTAATATTGCCTTTCAATTTTCTATCCTCTCCAAAACCTGAAGATTCCCTTGGTTTGTTGTTACCTTATTTATCTCGTTTCCAACGTTTGTCATATCTTGATCTGAGCTTTTGCAATCTACTTCAAATCCCTGATGCAATCGGGAACTTGCAGTCTTTAGTTGGACTAAATTTAGGAGGAAACAAATTTGTGACACTACCTTGTACCATCAAGCAACTTTCCAAACTTGAAATGTTGAACTTGGAGCACTGCAAGCAACTAAAATATTTGCCCGAGCTTCCAATAACAAAAGACAAAACAATTGGCAAATATTGGTGGCGATTATACATTTTTTACTGCCCCAGTTTGAGTGATATAGAACACTGCTATAGAATGGTTTTTTCTTGGATGACGCAAAATCTTGAGGTTTACTTCCAACGAATTACTTCCTCTGCTATGATGGAAATTGTTATTCCTGGGACTCAAATTCCAAAGTGGTTCAATAAACAAAATGCTCGTGGTTCAATAAGTGTGGATCTATCTTCTGTTATAGATGATCCAAATTGGATAGGTGTTGCCTTTTGTAAGGCTTGTCCTCCCACTTCTATATCACGAAAGAAGGCTTGTGCAATGGCTTGCAGTAGCATCCATACTAGCTCTTCATCACGCACAGGAAATTTCGACATGTTCGTAAGCTTTAGAGGTGAGGATACTCGTAATGGTTTTACCGATCACCTTTTTGCTGCTCTTCAGAGAAAAGGTGTTGCCTTCAGAGATGACCAAAAAATCAAGAAAGGGGAGCTCTTGGACCCTCAGCGATTGCAGGCTATCGAAGGATCGCGTGTTTTCATTGTTGTCTTCTCAAAGGACTATGCATCATCCACATGGTGCATGAAAGAGCTCACAAAGATTGTGGATTCGGTTGAAGAAACAGGCCGAAGTGTGCTTACCTGTTTTCTATGA 2412 0.3905 MACRQIQRSSSSRTKNFDVFVSFRGDTRNGFTDHLFAALQRKDVLAFRDDQTIKKGEFLESELLRAIEGSRVFIVVFSKDYASSTWCMKELTKIVETGRSLLPIFYDVTPSEVRKQSGEFAEAFAQHEERFKDDLEMLKKWREALKTSADRCGWDIQNKQQNEEIENIVEEVINILGYNQILSFGDDFVDMHSRVKKLEEFLDLGANDVVGLVGIRGMVKKLLDYREFYPDIGMKVLIEKSLISCRDGEIQMHDLLQELGKSIVREEAPKEPRKWSRLWDYKDLQKAMKINTEAKNLEAIVIEQRPEEFLQERIRVDALSKINHLELLILQNVNTFGSLNCISNELRYLNWDNFPFVSLPSTFEPDQLVELQLRYSNIKKLWEGTKMPDLTGVPHLTSLLLEGCIELVQIDPSIGILRELIDLDLKNCKNLVLNLNIIFGLGSLRSLNLSGCSKLLNSKMLMEPRDTQHLEKVDKNTSVVQRSTSSVYKLLILPFNFLSSPKPEDSLGLLLPYLSRFQRLSYLDLSFCNLLQIPDAIGNLQSLVGLNLGGNKFVTLPCTIKQLSKLEMLNLEHCKQLKYLPELPITKDKTIGKYWWRLYIFYCPSLSDIEHCYRMVFSWMTQNLEVYFQRITSSAMMEIVIPGTQIPKWFNKQNARGSISVDLSSVIDDPNWIGVAFCKACPPTSISRKKACAMACSSIHTSSSSRTGNFDMFVSFRGEDTRNGFTDHLFAALQRKGVAFRDDQKIKKGELLDPQRLQAIEGSRVFIVVFSKDYASSTWCMKELTKIVDSVEETGRSVLTCFL 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00823 803 Pfam C-JID domain 641 695 IPR045344 -
Spst11g00823 803 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 154 IPR035897 -
Spst11g00823 803 SUPERFAMILY Toll/Interleukin receptor TIR domain 700 803 IPR035897 -
Spst11g00823 803 SUPERFAMILY L domain-like 251 585 - -
Spst11g00823 803 Gene3D - 10 182 IPR035897 -
Spst11g00823 803 SMART till_3 709 801 IPR000157 GO:0007165
Spst11g00823 803 SMART till_3 16 151 IPR000157 GO:0007165
Spst11g00823 803 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 177 - -
Spst11g00823 803 Gene3D Ribonuclease Inhibitor 483 627 IPR032675 -
Spst11g00823 803 Gene3D Ribonuclease Inhibitor 295 482 IPR032675 -
Spst11g00823 803 ProSiteProfiles TIR domain profile. 708 803 IPR000157 GO:0007165
Spst11g00823 803 Pfam Leucine rich repeat 519 575 IPR001611 GO:0005515
Spst11g00823 803 Pfam TIR domain 710 802 IPR000157 GO:0007165
Spst11g00823 803 Pfam TIR domain 16 172 IPR000157 GO:0007165
Spst11g00823 803 ProSiteProfiles TIR domain profile. 15 176 IPR000157 GO:0007165
Spst11g00823 803 Pfam Leucine Rich Repeat 367 386 IPR011713 -
Spst11g00823 803 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 711 802 IPR044974 GO:0006952
Spst11g00823 803 Gene3D - 707 803 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00823 Spst-Chr11 32360425 32368265 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00823 219 569 WRKY Transcription Factor Family AT4G12020 29.199 7.65e-28 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00823 - - vun:114169377 644.81