Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00822 ATGGAGATACATAACGTTTCCCTGGGCATCAAGTTGGTAAGAAGTAGGTTATCTCACTTAAAGGCACTTATTATTCTTGATAATGTTGATAAACTTGAACAACTTGAGAAATTGGCTTTACTACCTACGCACCTAGGTGCAGGGAGTAGAGTTGTGATAATCTCTAGAGATAATCATATCTTAAGAAATCATAAAGTGGATGCAATTTACAATGTTCAACTCCTGAATGAAGATAAAGCTTTTCAATTGCTTTGCAGAAAAGCTTTCAAATGTGATAACATTGTGAAAGATTATATAGATTTGGCATATGAAGTACTGAAGTATGCTGATGGCCTTCTATTAGCAGTTGAAGTATTGGGCTCCTTTTTATTTGATAGAGATGTTTGTGAGTGGAGAAGTGCGTTGACCCTTAATAAGTCCGACCGACACCTTAGAATCGGTCTTCCAATGTAA 453 0.362 MEIHNVSLGIKLVRSRLSHLKALIILDNVDKLEQLEKLALLPTHLGAGSRVVIISRDNHILRNHKVDAIYNVQLLNEDKAFQLLCRKAFKCDNIVKDYIDLAYEVLKYADGLLLAVEVLGSFLFDRDVCEWRSALTLNKSDRHLRIGLPM 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00822 150 Gene3D - 74 147 IPR042197 -
Spst11g00822 150 Pfam NB-ARC domain 13 137 IPR002182 GO:0043531
Spst11g00822 150 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 138 IPR044974 GO:0006952
Spst11g00822 150 Gene3D - 2 71 IPR027417 -
Spst11g00822 150 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 138 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00822 Spst-Chr11 32358161 32360308 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00822 10 126 WRKY Transcription Factor Family AT5G45050 31.624 5.82e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00822 - - ccaj:109792037 190.274