Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00820 ATGGCCTGCAGACAAATTCAACGCAGCTCTTCATCACGAACGAAGAATTTTGACGTGTTTGTTAGCTTTAGAGGTGAAGATACTCGTAACGGTTTTACTGATCACCTTTTTGCTGCTCTTCGGAGAAAAGGTGTTGTGGCCTTCAGAGACGACCAAACAATAAAAAAAGGGGAATTCTTGGAGTCTGAGCTCTTGCGCGCAATTGAAGGGTCACGAGTTTTCATTGTTGTCTTCTCGAAGGACTATGCATCATCCACATGGTGCATGAAAGAGCTTACGAAGATCGTGGAAACAGGTCGAAGTTTGCTCCCTATCTTCTATGATGTCACTCCTTCTGAGGTCCGAAAACAGAGTGGAGAGTTTGCAGAAGCTTTTGCTCAACACGAAGAAAGGTTCAAAGATGACTTGGAAATGCTACAAAAATGGAGGGAAGCGCTCAAAACAAGTGGCGATCGTTGTGGGTGGGATATACAAAATAAGCAACAAAATGAAGAAATCGAAAACATTGTTGAAGAGGTAATCAACATATTGGGTTATAATCAAATTTTGAGTTTTGGAGATGATTTTGTTGATATGCATTCTCGTGTTAAACAAATGGAAGAACTTCTGGATTTGGGTGCAAATGATGTTGTTGGGCTTGTGGGAATTTTGAAGAAACTTCTAGACTATCGAGAATTTCATCCTGACATTGGTATGAAAGTTCTGATTGAGAAATCACTTATTAGTTGTCGAGATCGGAAGATTCAAATGCATGACTTGTTGCAAGAGTTGGGGAAGAGTATTGTCAGAGAAGAAGCACCCAAGGAACCAAGAAAGTGGAGCAGGTTATGGGACTACAAGGATCTCCAAAAAGCCATGAAAATAAATACGGAAGCCAAAAATCTTGCAGCTATAGTTATTGAACAACGTCCAGAAGAGTTTCTACAAGAAAGAATAAGAGTGGATGCTCTGTCAAAAATTAATCACCTTGAATTGCTCATACTTCAGAATGTGAACACTTTTGGATCTCTGAATTGTATTTCTAATGAACTGAGGTATCTGAATTGGGATAACTTTCCTTTCGTGTCTTTGCCATCAACTTTCGAGCCAGATCAACTTGTAGAATTGCAACTGCGTTATAGCAATATCAAGAAATTATGGGAAGGCACAAAGATCCTGCCTAAGTTGAGAACTCTGGATCTCAGTCACTCCAAAAATCTTATTGAGATGCCAGACTTAACAGGGGTTCCTCATCTTACGACTCTTCGACTTGAAGGATGTATAGAACTTGTCCAGATAGATCCATCCATTGGTATTCTAAGAGAACTTGTTTACTTGCAACGAACTATTTCCTCTGCTAAGACGGAAATTGTTATTCCTGGGACTCAAATTCCGGAGTGGTTTAATAAACAAAATGCTCGTAGTTCAATAAGTGTGGATCTATCATCTGTTATGGATGATCCAAATTGGATAGGTGTTGCCTTTTGTGTACTATTTGTCACACACCAAGATCCTACGAATTTGAGTGAAAGAAGGAATGGTCATCGTGATTGTATTGCATACGGTGTCCATAATAAACACCTTTTTCGAAAAGGTTATTTATTTGTTCCAATACATTTCAAGGAAGATCTGGTGGCAGTTGAATTAGATCACTTGTTTACAGTGTTTTACTCTCGGGAAGAATTCATCGGTCTTCTTACTCAAGATCCAGACAAAATGCTTGATCCTGCTAAATTGGAATTCGAAATTATTTCTAATAATAGTCAAGGTTTACGTATTGTTGTGAAGAATTGCGGATATCGTTGGGTATTTAAGGAGGATCTTCAACAATTACACTTGATGTTTGGCAGAAATTCTTCATCTCAGAAGAGTAAACATCTAAGGAGTGATTGA 1872 0.3873 MACRQIQRSSSSRTKNFDVFVSFRGEDTRNGFTDHLFAALRRKGVVAFRDDQTIKKGEFLESELLRAIEGSRVFIVVFSKDYASSTWCMKELTKIVETGRSLLPIFYDVTPSEVRKQSGEFAEAFAQHEERFKDDLEMLQKWREALKTSGDRCGWDIQNKQQNEEIENIVEEVINILGYNQILSFGDDFVDMHSRVKQMEELLDLGANDVVGLVGILKKLLDYREFHPDIGMKVLIEKSLISCRDRKIQMHDLLQELGKSIVREEAPKEPRKWSRLWDYKDLQKAMKINTEAKNLAAIVIEQRPEEFLQERIRVDALSKINHLELLILQNVNTFGSLNCISNELRYLNWDNFPFVSLPSTFEPDQLVELQLRYSNIKKLWEGTKILPKLRTLDLSHSKNLIEMPDLTGVPHLTTLRLEGCIELVQIDPSIGILRELVYLQRTISSAKTEIVIPGTQIPEWFNKQNARSSISVDLSSVMDDPNWIGVAFCVLFVTHQDPTNLSERRNGHRDCIAYGVHNKHLFRKGYLFVPIHFKEDLVAVELDHLFTVFYSREEFIGLLTQDPDKMLDPAKLEFEIISNNSQGLRIVVKNCGYRWVFKEDLQQLHLMFGRNSSSQKSKHLRSD 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00820 623 Gene3D Ribonuclease Inhibitor 306 463 IPR032675 -
Spst11g00820 623 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 216 IPR044974 GO:0006952
Spst11g00820 623 SUPERFAMILY L domain-like 312 439 - -
Spst11g00820 623 ProSiteProfiles TIR domain profile. 15 177 IPR000157 GO:0007165
Spst11g00820 623 Gene3D - 10 183 IPR035897 -
Spst11g00820 623 Pfam C-JID domain 452 601 IPR045344 -
Spst11g00820 623 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 178 - -
Spst11g00820 623 Pfam Leucine Rich Repeat 365 384 IPR011713 -
Spst11g00820 623 SMART till_3 16 152 IPR000157 GO:0007165
Spst11g00820 623 Pfam TIR domain 16 173 IPR000157 GO:0007165
Spst11g00820 623 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 155 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00820 Spst-Chr11 32318512 32322299 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00820 214 483 WRKY Transcription Factor Family AT5G45050 31.507 6.01e-31 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00820 - - vra:106780706 344.739