Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00812 ATGGAATCTCCTGTTGAAGAATTAGAAAAACTTTTACTTTGGGACCCAGTTGATGATGTACGCATTGTAGGAATTTGTGGCATGGGTGGAATCGGAAAGACTACTCTCGCTACGGTTTTATTCGATAGAGTCTCTCATCAATATGATGCCAAGTGTTTTATTGATGATGTAAGTAAAGCTTATAGGGATTGTGGTACAATTGGTGTACTAAAGCAGCTGCTTCAACAAACTCTAAATGAAGAAAACCTTCAGATATGCAATCTTTATAACGCAGCCAATTTGATGCAAAGAAGGCTACGTTATGTAAAGACACTTATAGTTCTTTATAATGTTGATGATGTTGAACAACGAGAGAAATTAGTTGTGAATCGTGAATGGTTAGGTGCAGGAAGTAGAGCCATCATAGTTTCCAGAGACAAGCACGTGTTAAAAGAGTTTGGAGTGACTACAGTGTACAATGTTCCACTCTTTAATGGTCCTGATTCTCTTAAATTGTTCTGTAAAAAGGCTTTCAATAGTGATGAGATTGTAGGAGATTACAAAGACTTGACACATGATGTGTTAGAACATGCTAAGAACCTACCACTGGCAATTAAAGTACTAGGTTCATTTTTGTGTGGAAGAAGTGTGTCAGAGTGGAGAAGTGCCTTGGTTAGATTGAAAGAAATTCCTAACAAAGATATTTTAGATGTGCTTCAAATTAGTTATGATCGACTAGAAGATTCTGAAAAACAAATATTTTTGGACATTGCTTGTTTCTTCAGCGGGTATGAGGAGTTGTATGTGAAGAAAGTTCTTGATTGTCGAGGATTGCACTCTGAAATTGGAATAAGAGTCCTCCTTGATAAGTCACTCATAGACAACTCACATGGATGCATTGAAATGCATGGTTTGTTGAAGGATTTAGGCAGGAAAATTGTTAAAGGCAATTCTCCCAAAGAGCCAGGAAAGTGGAGTAGGTTGTGGGTACATGAAGATTTCTACAATACGTCCAAGGCAACAGAAACAACAAACACTGAAGGAATTGTTTTAGAGATGTCAATAGAGATGAAAGTATTGATGACTGATGCTGAAGTGTTGTCCAAAATGAGTAACCTTAGGTTGCTCATACTCCATGGTGTGAACTTTATGGGAAGCCTTAATTGCCTCTCCGATAAATTACAATATCTTGAGTGGTTTCACTACCCTTTCTCCTATTTACCATCAAGTTTTCAGCCCAACTCACTGATTGAATTGATCTTGAGACGTAGCAACATCAAACAACTATGGAAAGGCACAAAGTATCTGCCAAATTTAAGAGTTTTGGATCTCAGTGATTCCAAGAATATTACTAAGGTTCCAAACTTTAGAGGGGTTCCAAATCTTGAGCGGATAATTCTTGACGGTTGCACAAAACTTGCGTGGATCAATCCATCAGTTGGTCTTCTAAAAAGGCTTGCTTTCTTAAGTTTGAAAAACTGCATTAATCTAGTAAGTCTACCCAGCAATATATTGGGCTTGAATTCTCTTGAATATCTGAACATCTCTGGCTGTCCAAAAGTATTTAGTAACCAGATGTTAGATAAACCAATTCGTGAGGAGCATTCTAAGATTCTTGGTATCAGGGAAACTGGCATGCAATCCCAATCAACATCCTCTTCTATCATCAAGAAATTTATATCTTTCAATTTCTGCTGCACTAAAGGGTATAAAAGTTCAGGTGGTTGTTTGTTGCCTTCCTTGCCTACCTTCTTTAGTATGCAAGACCTTGATTTAAGTTTCTGCAATCTAAGTCAAATCCCTGATGCTATTGGATCCATGCATTCTTTAGAAACCTTAAATTTAGGGGGGAACAACTTTGTTAGCCTCCCTTCGAGCATCAGCAAACTGTCAAAACTCATATATTTAAACTTGGAGCATTGCAAGCAATTGAGATTTTTTCCTGAGATGCCATCACCTACTGCTTTGCCTGCTATAAGAGGAACGTACACTGTTGCTCCTTATGGAAGGGGATTGTATATCTTCAATTGTCCAAAAATAGTTGATATTGAAGGTTGTCATGGAATGACTTTTGCATGGTTGTTACAAATCCTTCAGGTGAGCCAAAAATCAGGTACCCCAATTGGTTGGATTGATATTGTTCTTCCTGGTAATCAAATACCAAGATGGTTCAGCAATCAAAGTCTTGGTACTTCAATAAGCTTAGACCCATCCCCCATTATGCATGACAATAACTGGGTTGGCTTTGCTTGCAGCGTGCGATTTAGTTACAGCTGGATTGCATCACTTATGGCTACTCTACTTGACTAA 2289 0.3801 MESPVEELEKLLLWDPVDDVRIVGICGMGGIGKTTLATVLFDRVSHQYDAKCFIDDVSKAYRDCGTIGVLKQLLQQTLNEENLQICNLYNAANLMQRRLRYVKTLIVLYNVDDVEQREKLVVNREWLGAGSRAIIVSRDKHVLKEFGVTTVYNVPLFNGPDSLKLFCKKAFNSDEIVGDYKDLTHDVLEHAKNLPLAIKVLGSFLCGRSVSEWRSALVRLKEIPNKDILDVLQISYDRLEDSEKQIFLDIACFFSGYEELYVKKVLDCRGLHSEIGIRVLLDKSLIDNSHGCIEMHGLLKDLGRKIVKGNSPKEPGKWSRLWVHEDFYNTSKATETTNTEGIVLEMSIEMKVLMTDAEVLSKMSNLRLLILHGVNFMGSLNCLSDKLQYLEWFHYPFSYLPSSFQPNSLIELILRRSNIKQLWKGTKYLPNLRVLDLSDSKNITKVPNFRGVPNLERIILDGCTKLAWINPSVGLLKRLAFLSLKNCINLVSLPSNILGLNSLEYLNISGCPKVFSNQMLDKPIREEHSKILGIRETGMQSQSTSSSIIKKFISFNFCCTKGYKSSGGCLLPSLPTFFSMQDLDLSFCNLSQIPDAIGSMHSLETLNLGGNNFVSLPSSISKLSKLIYLNLEHCKQLRFFPEMPSPTALPAIRGTYTVAPYGRGLYIFNCPKIVDIEGCHGMTFAWLLQILQVSQKSGTPIGWIDIVLPGNQIPRWFSNQSLGTSISLDPSPIMHDNNWVGFACSVRFSYSWIASLMATLLD 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00812 762 Gene3D Ribonuclease Inhibitor 538 724 IPR032675 -
Spst11g00812 762 Gene3D Ribonuclease Inhibitor 350 531 IPR032675 -
Spst11g00812 762 Gene3D - 1 150 IPR027417 -
Spst11g00812 762 SUPERFAMILY L domain-like 309 671 - -
Spst11g00812 762 ProSiteProfiles Leucine-rich repeat profile. 602 623 IPR001611 GO:0005515
Spst11g00812 762 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 250 IPR027417 -
Spst11g00812 762 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 514 IPR044974 GO:0006952
Spst11g00812 762 Pfam C-JID domain 708 750 IPR045344 -
Spst11g00812 762 Gene3D - 158 240 IPR042197 -
Spst11g00812 762 Pfam Leucine rich repeat 581 635 IPR001611 GO:0005515
Spst11g00812 762 Pfam Leucine Rich Repeat 409 427 IPR011713 -
Spst11g00812 762 PRINTS Disease resistance protein signature 98 112 - -
Spst11g00812 762 PRINTS Disease resistance protein signature 191 205 - -
Spst11g00812 762 PRINTS Disease resistance protein signature 22 37 - -
Spst11g00812 762 PRINTS Disease resistance protein signature 427 443 - -
Spst11g00812 762 Pfam NB-ARC domain 2 224 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00812 Spst-Chr11 32173189 32175996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00812 7 501 WRKY Transcription Factor Family AT5G45050 34.717 7.65e-74 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00812 - - gmx:100820213 1169.07