Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00805 ATGGCTACCACTGTAACAGAGCAAGAGTCCTTATCACGGGTCTCGCACGTGTTAGACTACACCACCACCACCACCTCCGAGGAGGAGGAGGAGGAGCATGTAGAAGGCAACGAGAACGACTCCGGAGGTGTGGGGTGTTTTTGGTCGGCGGCGTGCGAAGGGACACGAGGGAGCGGGGGAGGCGCGTTGGGGAGGGTGTTGGACCCGAGGGCGAGGTGGGTCCAGGAATGGAACAGAGTATTCCTGCTAGTGTGCGCTGCGGGGTTGTTCGTGGACCCTCTGTTCTTCTACGCGCTCTCCGTTAGCGCCTCGTGCATGTGCGTGTTCGTGGACGGGTGGCTCGCCGTTACCGTGACTGTGCTGCGGTGCATGACGGACGCGCTTCACCTGTGGAACATGGTGCTCAGAATGAAGATGGCCAAACGCACGTTCGGGTTGGGCGCCGCCGCGTCTTCCGCCGGACTCAGAGACACCCGGCCGCGCTCCGTCGCGCTAGGATATCTCAAGTCACGGACCGGATTCGTTTTTGATTTGTTCGTCATTCTTCCTCTGCCACAGATTGTGCTGTGGGTGGCAATTCCGTCGTTGTTGGAGAAAGGTTCAGTGACGTTGGTGATGACAGTGTTCTTGATCATATTTCTCTTCCAATACCTTCCCAAAATTTATCATTCTGTTTGCCATCTGCGACGCACGCAAAACCTCTCTGGCTACATTTTTGGAACAGTTTGGTGGGGAATCGCCCTTAACATGATCGCTTATTTTGTTGCTTCCCATGGTAAAGCTTATATAAGTGAGGAGAGACTTGTTTCTGGCGTTGCAAATGAAGAAAGTGTTAACCATGTATCAGTTCATGAACAGGCAGCAGGGGCATGTTGGTATTTGCTTGGGATTCAAAGGGCTGCCAAGTGTTTGAAAGTGCAGTGTGAAAAAACAAGTGGCTGTGGCATGAGCATTGTGTCATGTCAAACCGCTGTTTATTATGGAAGCAACAATTTTTTGGTAAGGGATAGAGCGAGGTTGGCATGGGCACAGAACAGAGAAGTGTGGGACACATGCTTGAATGGCCCTGACAAATACACCTATGGAGCTTATAAATGGACAGTTCAGCTTGTCACTAATGATAATCGTTTGGAAAAGATACTTTTCCCTATCTTCTGGGGCCTAATGACTCTGAGCACCTTCGGAAACCTAGAAAGTACAACTGAATGGCTAGAAGTAGTTTTCAACATCATTGTGCTGACCAGTGGCCTTCTTCTTGTCACCATGTTGATTGGGAACATCAAGGTATTTTTGCATGCAACAACGTCAAAGAAGCAAGCAATGCAACTGAAGATGAGGAATATTGAATGGTGGATGAGGAAACGAAGGTTGCCGCAAGGGTTTCGGCAGCGTGTGCGTAACTATGAGAGGCAGCGTTGGGCTGCCATGAGAGGAGTTGATGAATGCGAGATGACTAGAAATCTCCCTGAGGGTTTAAGAAGAGACATCAAGTACCATCTTTGTCTTGACCTGGTTAGACAGGTGCCTCTATTTCAACACATGGACGATCTGGTTCTAGAGAACATCTGTGACCGAGTGAAGTCTCTGATATTCACAAAGGGAGAAACAATAGCAAGAGAAGGAGACCCAGTTCAGAGAATGCTATTTGTAGTAAGGGGTCACCTTCAAAGCAGCCAAGTTCTAAGGGATGGTGTGAAGAGTTGCTGCATGTTAGGGCCAGGAAACTTCAGCGGTGACGAGCTTCTTTCATGGTGTTTGAGGAGACCCTTCATAGAACGTCTTCCACCATCTTCATCCACACTGATCACATTGGAAACCACAGAGGCTTTTGGCCTTGAAGCCGATGACGTGAAGTACGTGACGCAACATTTCAGGTACACATTTGTTAAGGAAAAGGTGAAGAGAAGTGCAAGGTATTACTCACCAGGGTGGAGAACTTGGGCTGCTGTGGCCATTCAATTGGCTTGGAGGAGGTACAAGCATAGGTTGACTTTGACCTCTCTGTCCTTTATAAGGCCTAGGAGACCCTTGTCAAGGTCCTCTTCCATGGGAGAGGATAGGCTTCGTCTCTACACTGCTTTGTTAACCTCACCAAAGCCTAATCAGGATGATTTTGACTTTTGA 2124 0.4911 MATTVTEQESLSRVSHVLDYTTTTTSEEEEEEHVEGNENDSGGVGCFWSAACEGTRGSGGGALGRVLDPRARWVQEWNRVFLLVCAAGLFVDPLFFYALSVSASCMCVFVDGWLAVTVTVLRCMTDALHLWNMVLRMKMAKRTFGLGAAASSAGLRDTRPRSVALGYLKSRTGFVFDLFVILPLPQIVLWVAIPSLLEKGSVTLVMTVFLIIFLFQYLPKIYHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHGKAYISEERLVSGVANEESVNHVSVHEQAAGACWYLLGIQRAAKCLKVQCEKTSGCGMSIVSCQTAVYYGSNNFLVRDRARLAWAQNREVWDTCLNGPDKYTYGAYKWTVQLVTNDNRLEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRRLPQGFRQRVRNYERQRWAAMRGVDECEMTRNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETIAREGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLITLETTEAFGLEADDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLSFIRPRRPLSRSSSMGEDRLRLYTALLTSPKPNQDDFDF 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00805 707 FunFam cyclic nucleotide-gated ion channel 4 508 626 - -
Spst11g00805 707 Gene3D Jelly Rolls 508 626 IPR014710 -
Spst11g00805 707 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 288 672 - -
Spst11g00805 707 MobiDBLite consensus disorder prediction 21 41 - -
Spst11g00805 707 SUPERFAMILY Voltage-gated potassium channels 69 431 - -
Spst11g00805 707 Pfam Cyclic nucleotide-binding domain 531 618 IPR000595 -
Spst11g00805 707 FunFam Cyclic nucleotide-gated ion channel 1 437 501 - -
Spst11g00805 707 ProSiteProfiles cAMP/cGMP binding motif profile. 510 620 IPR000595 -
Spst11g00805 707 SUPERFAMILY cAMP-binding domain-like 436 624 IPR018490 -
Spst11g00805 707 CDD CAP_ED 510 616 IPR000595 -
Spst11g00805 707 Gene3D Helix hairpin bin 435 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00805 Spst-Chr11 32062823 32069090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00805 52 706 Ion Channels AT5G54250 74.811 0.0 996
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00805 K05391 - gmx:100796761 1198.73