Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00794 ATGTCAATTGCAATGTCAGGTCTGAGCAATCTGGTTGTTGGAACCTTTGGTCATAGAGAGTCAAATTTTATGTCTGAGTTAGACGCACAAATTCCTACTGCCTTTGATCCTTTTGCTGAGGCAAATTCTGATGACTCGGGTGCTGGGTCAAAGGAGTATGTGCATATTCGCGTACAGCAGCGAAATGGTAGAAAAAGCCTGACAACTGTTCAGGGATTGAAAAAAGAATTCAGCTATAACAAGATACTTAAAGACGTTAAGAAAGAATTCTGTTGCAATGGCACAGTTGTTCAGGACCCAGAACTAGGACAGGTTATTCAACTTCAAGGTGATCAGCGGAAGAATGTCTCTGCCTTCCTAGTCCAGGCTGGTATCGTGAAGAAGGAGCATATCAAGATTCATGATGTTTTACCATGTGATGTGGGTTATGGTTATGGTTATGGATTTTCGAACATTTTGTGTTATTTGCTTTCAAGACATATATGA 486 0.4053 MSIAMSGLSNLVVGTFGHRESNFMSELDAQIPTAFDPFAEANSDDSGAGSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDVKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSAFLVQAGIVKKEHIKIHDVLPCDVGYGYGYGFSNILCYLLSRHI 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00794 161 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 29 134 - -
Spst11g00794 161 NCBIfam translation initiation factor SUI1 29 135 IPR005874 GO:0003743
Spst11g00794 161 SUPERFAMILY eIF1-like 23 135 IPR036877 GO:0003743|GO:0006413
Spst11g00794 161 CDD eIF1_SUI1 52 134 IPR005874 GO:0003743
Spst11g00794 161 FunFam Eukaryotic translation initiation factor SUI1 25 136 - -
Spst11g00794 161 Pfam Translation initiation factor SUI1 51 125 IPR001950 GO:0003743|GO:0006413
Spst11g00794 161 ProSiteProfiles Translation initiation factor SUI1 family profile. 54 124 IPR001950 GO:0003743|GO:0006413
Spst11g00794 161 Gene3D - 14 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00794 Spst-Chr11 31728811 31730466 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00794 24 134 Eukaryotic Initiation Factors Gene Family AT4G27130 87.387 5.56e-71 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00794 K03113 - pcin:129312453 237.269