Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00787 ATGGCTTCTAACGCCATCATCCACTGCAACTCCTCTTCATCTCACCTCATACCAACATACGACGTCTTTGTGAGCTTCCGAGGTGAAGACACTCGCAATAACTTCACTGGATTTCTCTTCGAAGCTCTTGGTAAAATGGGGATTGATGTCTTCAAAGATGATACACATCTCAAGAAAGGGGAATTCATAGCACCCGAGCTGTTGCAAGCCATTGAAGGGTCTCGTATTTACGTTGTGGTCTTCTCAAAGAACTATGCTTCCTCAAAGTGGTGCTTGCGTGAACTTGCGCACATCTGCAATTGCATTGAAACACCAGGAAGACATGTTCTGCCTATTTTTTATGATGTGGATCCGTCAGATGTTCGAAAACAAAGTGGATATTTTGAGAAAGCCTTTTCTGATCATGAAGAAAGATTCAGAGAAGAAAAGTTGTTGATGGAGGAAATTCAGAGATGGAGAGAAGCTCTCACACGAGTGGCCAATCACTCTGGCTGGGATATCCGAAACAAGCCACAATATACAGAGATTGAAGAGATTGCTGAGAAAATAAGAAATATCTTGGGTCATAAATTTTCATGTCTTCCAAATGATAATCTAGTTGGGATAGAATCTAGTGTCGAGGTATTATCAAAACGTTTATGTTTGGAGTCTCTTAATGATGTTCGTGCTGCTGGAATTAGTGGAATGGGTGGTATAGGAAAGACAACTCTGGTTCGTGCTTTATATGAAAGAATCTCTCATAAATTTGATTTTTGTTGTTTTATTGATGATGTAAGCAAACTTTATCAAGATTGTGGTACATTAGGAGTACAAAAGCAGTTACTTTATCAATGTCTAAATGAAAAAAATTTAGAAATTTTCAATGTTTCCGAGGGAACATCTTTGGTATGGAGTAGGGTACGGAATGGTAGGGCTCTTATTGTTCTAGATAACGTGGATCATGTAGGACAACTAAAGATATTTACAGGGAGTAGAGGGAATCTGTTAGGTGAAAGCTTGGGTGGAGGGAGCAGAATCATCATAATTTCTAGGGATGAACATATATTGAGAACACATGGAGTAGATGATGTTTACCAAGTTCAGCCATTGAATGACACAGATGCTGTTCGACTGTTTTATCAAAATGCTTTCAAGAGTAATTATGTAAAGAGTGGATATGAAGAGTTTACAGATGTTATAATGTTACATTGTCAAGGCCATCCCTTAGCAATTGAAGTATTGGGCTCTTCTTTGTTTGGTCGAAGTGTCTCACAGTGGAGAAGTGCATTGATTAGGCTAAGGGAAAACAAAAGTAAAGATATAATGGATGTGTTGCGAGTAAGTTTTGATCAGCTGGATGATACGGAAAAGGAAACATTTTTAGACATTGCTTGCTTTTTGAATTATGGAGAAGTGGAATATGTGAAGGAAGTTCTAGAATTTCGAGGATTTCATCCTGAATATGGTCTACAAGTTCTCATTGATAAATCACTCATTAAATATGGGCGTTATGGGAACCATATTTTAATTGAGATGCATATGTTGTTGGTAGACTTGGGCAGGTGTATTGTTCGAGATAAGGCACCTAAAGAGCCTAGAAAGAGGTGTAGGTTGTGGGATTACAAAGATCTCCACAAAGTTATGTCCGACAATATGGCTGCAGAAAATCTTGAAGCCATAGTGGTTCGAAATGAGACATCAGAGTTTCATAAAGCAACAGTAAGGGCTGACGCACTATCCAAAATGAGTTATCTTCAGTTGCTTGACCTGACGGACGTGAATTTTTCTGGAAACCTCAATCATCTTTCGAATGAGCTAGGATATCTTAGGTGGATAAACTATCCTTTTGATTGTTTGCCTCCAAGTTTTCAGCCGGAAAAACTTGTCGAGTTGTCGCTCATTGGCAGTGACATGAAACAATTATGGAAAGACACAAAGCCTCTACATAACTTGAGACGTTTGACTCTCTCCTATTCTCAAAATCTAATGGAAATTCCAAATGTGATTAAGGCAATAAAACTTGAAAAGCTGAATCTCAACGGATGTACCAAACTTAGGGAGATCCATCCATCCATTGGTCTTCTAAAGAAGCTTACTGATTTGAATTTGGAAGGTTGCAAAAATCTTGCCATGTTACCCCGTTTTGGAGAGACCATAAATATTGAAATCCTGAATCTCCGAGGATGTACCAAACTTAGGCAGATCGATCCATCCATTGGTCTTCTAAAGAAGCTTACTGATTTGAATTTGGAAGGTTGCAAAAATCTTGCCATGTTACCCCGTTTTGGAGAGACCATAAATATTGAAATCCTGAATCTCCGAGGATGTACCAAACTTAGGCAGATCGATCCATCCATTGGTCTTCTAAAGAAGCTTACATTTTTGAACTTGAAAGACTGCAAAAATCTAGTAAGCTTACCCAACAGTTTATTGGACCTCAAATCTCTTGAATATCTGAGTATCTCGGGTTGTTCGAAACTGTTTATTAACAAGTTATTAGATGAACCAAGAGACGAGCTTTTAAGGAAGCATTGTGAAGGTGAAGCTCCTGCTAATTCCCAATCATCATTCTCATTCGTCAAAATGTGGCCTTTAAATTTGTTGTATTCCAGAGCTCGTAAAGATACATCTACTGTTCTATTGCCTTTCTCACTTGGCTTCCCACATATGCGTGAACTTTATCTAAGTTTCTGCAATCTACTTCAAATCCCTGATGCTATTGGAAACTTACATTGCTTAGAAAGGTTAGATGTAAGCGGGAACAATTTCGCTACACTGCCCAGCCTCAAGGAGCTTTCCAAACTGTATTATCTAAACATACAGCATTGCAAACTGTTAAAATATTTGTGTGAACTCCCTTCACGAACTGAGTTGTCATCACTACCTAGTTATATTTGTTCAATTAAAGCAGGATTATATGTTTTCAACTGCCCAGGATTAGTTGAGAGGGAACTCTGCACAAACAAGGGATTTTCATGGACGATACAAATTATTGAGGCGCTCCAACAATGCATTTGCGAGAGTAGTAGCTACCAAATATGGCCTCCATTGATTTCAACTATTATTCCAGGAAGTGAAATACCAAGGTGGTTTCGCAATCAACATGTGGGCATGGGCAGTTTAATAACCATAGATTCGCTTCTTCTTGAGAATTGTGCTGGCAATTGCAACGTTGGTTGTTGTGTAGTATTCCCAGCTTGCTCCAGTAGGGAAAGAATTTTATGGATGGATCCTCAAAAAAGTGCAAGTAATGGTTATTTTGTTTTAGAAATTCCCCTGGATATAGATGAAGATCTTGTCACGGACAACTCAGATCACATGTTGTTGTTCTACGTCCTTGCACCGATGGAAGGGTCGAAATTGGAAATTGATGTAAAAGATAGACAAGGTTTTGGTGTTCAAGTGAAGAGATACGGCTACAGTTGGGATACGTAA 3414 0.3878 MASNAIIHCNSSSSHLIPTYDVFVSFRGEDTRNNFTGFLFEALGKMGIDVFKDDTHLKKGEFIAPELLQAIEGSRIYVVVFSKNYASSKWCLRELAHICNCIETPGRHVLPIFYDVDPSDVRKQSGYFEKAFSDHEERFREEKLLMEEIQRWREALTRVANHSGWDIRNKPQYTEIEEIAEKIRNILGHKFSCLPNDNLVGIESSVEVLSKRLCLESLNDVRAAGISGMGGIGKTTLVRALYERISHKFDFCCFIDDVSKLYQDCGTLGVQKQLLYQCLNEKNLEIFNVSEGTSLVWSRVRNGRALIVLDNVDHVGQLKIFTGSRGNLLGESLGGGSRIIIISRDEHILRTHGVDDVYQVQPLNDTDAVRLFYQNAFKSNYVKSGYEEFTDVIMLHCQGHPLAIEVLGSSLFGRSVSQWRSALIRLRENKSKDIMDVLRVSFDQLDDTEKETFLDIACFLNYGEVEYVKEVLEFRGFHPEYGLQVLIDKSLIKYGRYGNHILIEMHMLLVDLGRCIVRDKAPKEPRKRCRLWDYKDLHKVMSDNMAAENLEAIVVRNETSEFHKATVRADALSKMSYLQLLDLTDVNFSGNLNHLSNELGYLRWINYPFDCLPPSFQPEKLVELSLIGSDMKQLWKDTKPLHNLRRLTLSYSQNLMEIPNVIKAIKLEKLNLNGCTKLREIHPSIGLLKKLTDLNLEGCKNLAMLPRFGETINIEILNLRGCTKLRQIDPSIGLLKKLTDLNLEGCKNLAMLPRFGETINIEILNLRGCTKLRQIDPSIGLLKKLTFLNLKDCKNLVSLPNSLLDLKSLEYLSISGCSKLFINKLLDEPRDELLRKHCEGEAPANSQSSFSFVKMWPLNLLYSRARKDTSTVLLPFSLGFPHMRELYLSFCNLLQIPDAIGNLHCLERLDVSGNNFATLPSLKELSKLYYLNIQHCKLLKYLCELPSRTELSSLPSYICSIKAGLYVFNCPGLVERELCTNKGFSWTIQIIEALQQCICESSSYQIWPPLISTIIPGSEIPRWFRNQHVGMGSLITIDSLLLENCAGNCNVGCCVVFPACSSRERILWMDPQKSASNGYFVLEIPLDIDEDLVTDNSDHMLLFYVLAPMEGSKLEIDVKDRQGFGVQVKRYGYSWDT 1137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00787 1137 Gene3D - 191 355 IPR027417 -
Spst11g00787 1137 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 189 - -
Spst11g00787 1137 SMART till_3 19 162 IPR000157 GO:0007165
Spst11g00787 1137 Gene3D - 362 446 IPR042197 -
Spst11g00787 1137 ProSiteProfiles TIR domain profile. 18 187 IPR000157 GO:0007165
Spst11g00787 1137 Gene3D - 18 190 IPR035897 -
Spst11g00787 1137 Gene3D Ribonuclease Inhibitor 527 709 IPR032675 -
Spst11g00787 1137 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 753 IPR044974 GO:0006952
Spst11g00787 1137 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 456 IPR027417 -
Spst11g00787 1137 ProSiteProfiles Leucine-rich repeat profile. 905 926 IPR001611 GO:0005515
Spst11g00787 1137 Gene3D Ribonuclease Inhibitor 710 831 IPR032675 -
Spst11g00787 1137 SUPERFAMILY L domain-like 569 976 - -
Spst11g00787 1137 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 165 IPR035897 -
Spst11g00787 1137 Gene3D Ribonuclease Inhibitor 862 970 IPR032675 -
Spst11g00787 1137 Pfam TIR domain 20 185 IPR000157 GO:0007165
Spst11g00787 1137 Pfam NB-ARC domain 203 432 IPR002182 GO:0043531
Spst11g00787 1137 PRINTS Disease resistance protein signature 804 820 - -
Spst11g00787 1137 PRINTS Disease resistance protein signature 299 313 - -
Spst11g00787 1137 PRINTS Disease resistance protein signature 223 238 - -
Spst11g00787 1137 PRINTS Disease resistance protein signature 397 411 - -
Spst11g00787 1137 SUPERFAMILY "Winged helix" DNA-binding domain 433 541 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00787 Spst-Chr11 31684304 31688295 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00787 200 820 WRKY Transcription Factor Family AT5G45050 33.384 7.33e-84 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00787 - - vra:106756186 1177.93