Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00786 ATGCTAATTGCAATGGCTTCTTCATCTCAGCTCATCAAGACATACGATGTCTTTGTGAGCTTCCGTGGTGAAGACACACGCAACAACTTCGTTGGTTTTCTCTTTCAAGCTCTTCGAACAAAAAACATCGATGTCTTCAGAGATGATGAAGATCTGAAGAAAGGCGAATCCATAGCACCAGAGCTCCTACAAGCCATTCAAGGGTCTCGAATTTTCATTGCGGTCTTCTCAAAGAACTATGCTTTCTCTACTTGGTGCTTGCGTGAACTAGCAGAGATATGTAAATGCGTTGAAACGTCGCCAAGATCCGTTCTGCCTATATTTTATGATGTTGATCCTTCAGATGTGCGAAAACAGAGTGGCTGTTATGAGAAAGTATTTGCTGAACACGAAGAAAGATTCAGGGAAAGTAAAGAAAAGATGGAGGAAGTGCAGAGATGGAGAGAAGCTCTCACACATGTGGCCAATCTCTCTGGTTGGGATATTCGAAACAAGCAACAATATGCAGAAATTGAACAAATTGTTCAATACATACTAAATATACTGCGGCCCAATCTATTAAGTCTTCCAAATGATGATCTAGTTGGGGTAGAGAAATCCATTGAAGAATTAGCAAATGTTTTATGTTTGGAGTCAGTTGATGATGTTCGAGTTGTTGGAATTAGTGGGATGGGTGGCATAGGAAAAACAACTATTGCTCGGGCATTATATGAAAGAATCTCTCATCAATATGACTCTAGTTGTTTTATTGATGATGTAAGCAAAATTTATCGAGATTCAAGTTCATTAGGTTTACAGAAGCAGTTACTTTCCCAGTCTCTAAAGGAGAAAAATCTGGAGATTTGCAATGCTTCGGACGGAACATGTTTGGTGTGGACGAGGCTACACAATGCAAAGGCACTTCTTGTTCTGGACAACGTTGATCAAGTCGAACAACTAAGGATGTTTACAGGAAATAGAAACACTTTGTTGCGTGAATGCTTAGGTGGAGGGAGCAGAATCATCATAATTTCCAGGGATGAGCATGTATTGAGGACACATGGAGTGGATGATGTTTATCAAGTCCAGCCGTTGAATCATGAAAATGCACTTCAGTTGTTTTGTAAAAATGCTTTCAATGTTAATTATATTTTGAGCGAATTTCAAATGTTGGCAGGTAAAGTTCTATCACATGCTCAAGGCCATCCCTTGGCAATTAAAGTAATTGGGTCATCTTTGTTTGGTCGAAATGTATCACAGTGGAAAAGTGCAATGGCTCGGCTGGAAGAGAATAAAAGTAGAAATATTATGGATGTTTTGCGTATAAGTTTTGATCAGCTGGATGAAGGAGACAAAGAAATATTTTTGGATATTGCTTGCTTCTTCTGGGGTGGTTGTGAAGCAGAAAATGTGAATGAAGTTTTAAATTTCCGAGGATTTCATCCAGAATATGGCATACAAGTTCTGGTTGATAAATCACTCGTAACTATTGATAATTATGGGTGGATTAATATGCATAGGTTGTTGAGTGATTTAGGCAAGTGTATTGTACGAGAAAAATCACCTAAGGAGCCTATAAAGCGGAGTAGGTTGTGGGATTTCCAAGATCTCCACAATGCCTTGTTAGACAATCAGGCAACTGAAAACCTTGAAGCTATCGTTGTTTCAGGCGATGAGTTCAATAAGCCTATTAAAACGACAATGATGGCAGATGGTCTATCAAAAATTAAGCACCTTAAGTTGCTTTATCTTGAGAACTTGAACTTCTCAGGAAGTCTCGTTCATCTATCGAATGAACTAGGGTATCTTACTTGGACACAATATCCTTTTGAATGTTTGCCTCCAAGTTTTCAACCAGATAAACTTGTAGAGTTAAATCTTGGTGGGAGCAACATTCAACGACTATGGACAGGCAAAAAGCCTCTGCACAATTTGAAACGTTTGAATCTCTCTTTCTCCAAAAATCTTGTTGAGATGCCAGATCTTGGAGACGCCCTAAATCTTGAACGGCTAGATCTTGTAGGATGTATACAGCTCAAGAAAATCAATCCATCCGTTGGCCTTCTGAGAAAGCTTGCTGTTTTGAATTTGACAAACTGCATAAACCTAGTAAGCTTACCCAAGAACCTATTGGGCCTGACTTCTCTTGAATATCTGAGTGTCTCTGGATGTTCAAAACTGTATAATAATCAGTTATTAGATGAACGAAGGAATGGAGATCATTTGAAGAAGCTTTGTTTAGTTGAAGCTCTTTTCCATTCCGAGACAAAATCCTCTCTCATAAAAAAAATGGTTTCGTGGCCTTTGGATTTGTTGTATTCCAGAGCACAGAGAGAGCCAGTTAGCTGTTTAACACCTTCCTCTCCTACTCTGCCTTGTTTGCGTGAACTTGATCTAAGTTTCAGTAACTTAGTTCATATCCCTGATGCCATTGGAAAGTTACATTGCTTAGAAAGGCTAAATTTAAAGGGAAACAATTTTGTTACGCTTCCCAGCCTCAAGGACCTTTTCAGACTCTATAGTTTAAACTTACAGCATTGCACGCGGTTGAAATATTGTCCTGATCTCCCTTCACGAATTGACTTGTCCTCAAAACGTTACAGTCAGTTATTGCCATTTGATCCCATTGTATTTTTACATCAACGCGACGAAATTAGGGGAGGATTAAGCATTTTCAACTGTCCTGAATTAGTTGATAGGGAACGGTGCACTAGCATGGGTTTTTCATGGATGATAAAATTTGTTCAGGCGAGCCACCAATGCAGATGTCTTCCATTTAGTCCATTCGGTGCAAATGTTGAGAGTATTATCCCTGGAAATGAAATACCGAGGTGGTTTAACAATGAGCATGTGAGCATTGACAATTCAATAATCATCGATGCATCTTCTGTAGCGCAGGACAATTATTGGATTGGAGTTGTGTGTTGTGTTATATTCCAGATACGGAAAATGACTTCTCCAACAACAGCACCACTTTCCGGTGATACAATTCCAGTGGATGTCAGAAGAGATCTATTGATGGACGAATCAGATCACATGTGGTTATTCTATTTCAGTCGGCAAGCGTTCATTAAAGGATGCAACGGCAGGGGCATACCTAATATTGATGGCTTGAAAATGAAAATTAAAATAAGGGACATGGAAGATTCTCGTGATTTATGTGTAGAATGGGGGAACGAGGAAGAGAATTTTTTTCCGGAATTCTGGCAAATGGATAAGAAAGTTTTTCCGGTTGAAGTGAAGAAATACGGGTACCGTTGGGTATCTGAACAAGATCTAAAACTATCAAATGCGACAATGATGTATGGTGGAAATTTGACAACTCGAAAGCGCAAGTTTTTGGCAATGGAAGAAAACAAGTAG 3342 0.392 MLIAMASSSQLIKTYDVFVSFRGEDTRNNFVGFLFQALRTKNIDVFRDDEDLKKGESIAPELLQAIQGSRIFIAVFSKNYAFSTWCLRELAEICKCVETSPRSVLPIFYDVDPSDVRKQSGCYEKVFAEHEERFRESKEKMEEVQRWREALTHVANLSGWDIRNKQQYAEIEQIVQYILNILRPNLLSLPNDDLVGVEKSIEELANVLCLESVDDVRVVGISGMGGIGKTTIARALYERISHQYDSSCFIDDVSKIYRDSSSLGLQKQLLSQSLKEKNLEICNASDGTCLVWTRLHNAKALLVLDNVDQVEQLRMFTGNRNTLLRECLGGGSRIIIISRDEHVLRTHGVDDVYQVQPLNHENALQLFCKNAFNVNYILSEFQMLAGKVLSHAQGHPLAIKVIGSSLFGRNVSQWKSAMARLEENKSRNIMDVLRISFDQLDEGDKEIFLDIACFFWGGCEAENVNEVLNFRGFHPEYGIQVLVDKSLVTIDNYGWINMHRLLSDLGKCIVREKSPKEPIKRSRLWDFQDLHNALLDNQATENLEAIVVSGDEFNKPIKTTMMADGLSKIKHLKLLYLENLNFSGSLVHLSNELGYLTWTQYPFECLPPSFQPDKLVELNLGGSNIQRLWTGKKPLHNLKRLNLSFSKNLVEMPDLGDALNLERLDLVGCIQLKKINPSVGLLRKLAVLNLTNCINLVSLPKNLLGLTSLEYLSVSGCSKLYNNQLLDERRNGDHLKKLCLVEALFHSETKSSLIKKMVSWPLDLLYSRAQREPVSCLTPSSPTLPCLRELDLSFSNLVHIPDAIGKLHCLERLNLKGNNFVTLPSLKDLFRLYSLNLQHCTRLKYCPDLPSRIDLSSKRYSQLLPFDPIVFLHQRDEIRGGLSIFNCPELVDRERCTSMGFSWMIKFVQASHQCRCLPFSPFGANVESIIPGNEIPRWFNNEHVSIDNSIIIDASSVAQDNYWIGVVCCVIFQIRKMTSPTTAPLSGDTIPVDVRRDLLMDESDHMWLFYFSRQAFIKGCNGRGIPNIDGLKMKIKIRDMEDSRDLCVEWGNEEENFFPEFWQMDKKVFPVEVKKYGYRWVSEQDLKLSNATMMYGGNLTTRKRKFLAMEENK 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00786 1113 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 183 - -
Spst11g00786 1113 PRINTS Disease resistance protein signature 392 406 - -
Spst11g00786 1113 PRINTS Disease resistance protein signature 680 696 - -
Spst11g00786 1113 PRINTS Disease resistance protein signature 294 308 - -
Spst11g00786 1113 PRINTS Disease resistance protein signature 218 233 - -
Spst11g00786 1113 Pfam NB-ARC domain 198 427 IPR002182 GO:0043531
Spst11g00786 1113 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 160 IPR035897 -
Spst11g00786 1113 Gene3D Ribonuclease Inhibitor 748 891 IPR032675 -
Spst11g00786 1113 Gene3D Ribonuclease Inhibitor 529 736 IPR032675 -
Spst11g00786 1113 SUPERFAMILY L domain-like 564 850 - -
Spst11g00786 1113 ProSiteProfiles Leucine-rich repeat profile. 809 830 IPR001611 GO:0005515
Spst11g00786 1113 Pfam TIR domain 15 178 IPR000157 GO:0007165
Spst11g00786 1113 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 451 IPR027417 -
Spst11g00786 1113 Gene3D - 12 185 IPR035897 -
Spst11g00786 1113 ProSiteProfiles TIR domain profile. 13 182 IPR000157 GO:0007165
Spst11g00786 1113 SUPERFAMILY "Winged helix" DNA-binding domain 428 533 IPR036390 -
Spst11g00786 1113 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 721 IPR044974 GO:0006952
Spst11g00786 1113 Gene3D - 186 350 IPR027417 -
Spst11g00786 1113 SMART till_3 14 157 IPR000157 GO:0007165
Spst11g00786 1113 Gene3D - 357 441 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00786 Spst-Chr11 31661163 31665121 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00786 13 813 WRKY Transcription Factor Family AT4G12020 29.714 6.19e-86 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00786 - - pvu:PHAVU_010G055200g 1263.44