Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00782 CCTGAGTTGCTACAAGCCATTCAAGGGTCTCGCCTTTTCCTCACTCTCTTCTCAAAAAACTATGCTTTCTCTACTTGGTGCTTGCGTGAACTAGCAGAGATCTGTAACTGCGTTGAAACGTCGCCAAGACGTGTTATACCTATATTTTATGATGTTGATCCTTCAGATGTGCGAAAACAGAGTGGGTGTTATGAGAGAGCATTTGCAGAACACGAAGAAAGATTCAGAGAAGATAAAGAAAAGATGGAGGAAGTGCAGAGATGGAGAGAAGCTCTCACTCATGTGGCCAATCTCTCTGGTTGGGATATAAGAAACAAGCAACAATATGCAGAAATTGAACAAATTGTTCAAAACATAATAAATATACTGCGTCCCAACTTATTAAGTCTTCCAAATGATGATCTAGTTGGGATAGAGTCTCGGATTGAAGAATTAGCAAATGTTCTATGTTTGGAGTCAGTTGATGATGTTCGAGTTGTTGGCATTAGTGGGATGGGTGGCATAGGAAAAACAACTCTTGCTCGCGCTTTATATGAAAGATTCTCTCGTCAATATGATTTTCATGGTTTTATTGATGATGGAACAAGTTTGGTGTGGAGTAGGCTACACAGTACAAAGACATTTGTTGTTCTTGACAATGTTGATGATGTTGAACAACTGAGAATGTTTACAGGGAATAGATACACTTTGTTGCGTGAATGCTTAGGTGGAGGGAGCAGAATCATCATAATTTCCAGGGATGAGCATGTATTGAGGACACATGGAGTGGATGATGTTTATCAAGTCCGCCCTTTGACTGAAAAAAATGCTGTCGAGTTGTTTTGTAGGCATGCTTTCAAAGTTAATTATATTATGAGCGAATATGAAGGATTGGCACGTGATGTACTATCACATGCTGAAGGGCATCCCTTGGCAATTAAAGTAATTGGGTCATCTTTGTTTGGTCGAAACGCATCACAATGGAAAGGTGCATTGGGTAGGCTCAAAGAGAATAAAAGTAGAAATATTATGGATGTTTTGCGTATAAGTTTTGATCAGTTGGATGAAGGAGACAGGAATATTTTTGGATATTGCTTGCTTCTTCTGCAGCAAGTGTATTGTACGAGAAAATCACCTAAGGAGCCTATAAAGTGGAGTAGGTTGTGGGATTTCCAAGATCTCCACAATGCCTTGTTAGACAATCAGCCTCTGCACAATTTGAAACGTTTGGTTCTCCCTTTCTCCAAAACCCTAGTTGAGATTCCAGATATTGGAGATGCTCTAAATCTCGAATGGCTAGATCTTGAAGCATGCAGACAGCTCAAAAAAATCAATCCATCCGTTGGCCTTCTGAGAAAGCTTGCTGTTTTGAATTTGAAAAACTGCATAAACCTAGTAAGCTTACCCAAGAACCTATTGGGCCTGACTTCTCTTGAATATCTGAGTGTCTCTGGGTGTTCAAAACTGTATAATAATCAGTTATTATATGAAGGATGGAATGGAGAGCATTCGAAGAAGCTTTGTTTAGTTGAAGCTGCTTTCCATTCCGAGACAAAATCCTCTCTTATAAAAAATATGTTTTCGTGGCCTTTGGATTTGTTGTATTCCAGAGCACAGAGAGAGTCAGTTAGCTGTTTAACACCTTCCTCTCCTACTCTCTGTTGTTTGCGGGAACTTAATCTGAGTTTCAGTAACTTAGTTCATATCCCTGATGCCATTGGAAAGTTACATTGCTTAGAAAAGCTATATTTAAAGGGAAACAATTTTGTTATGCTTCCCAGCCTCAAGGACCTTTTCAGACTCTATAATTTAAACTTACAGCATTGCACGCGGTTGAAATATTGTCCTGATCTCCCTTCACGAATTGACTTGCCCTCAAAACGTTACTTTAGTGTCTTGCCATATTCACCTACTATCAATGTACTTCATGTTGTACAACACGACGAAGTTAATGGAGGATTAAACATTTTCAACTGTCCAGATTTAGTTGATAGGGAACGATGCACTAGCATGGCTGCTTCATGGATGATAAACATTGTTCAGGCGAACCACCAACACAGATGTCTTCCATCAAGTTTTATGGGTCCAAATGTTGGAAGTATTATCCCTGGAAGTGAAATACCGAGGTGGTTTAACAGTGAGCATGTGAGCACCGACAATTCAATAATCATAGATGCATCTCCTGTCGCGCAGGACAATTATTGGATTGGAGTTGTGTGTTGTGTAATATTCCAGATACGGAAAATGACTTCTCCAACAAAAACACCACTTTCCGGTGATAAAATTCCTGTGGATGGCATACCTAATATTGATGGCTTGAAATTGAAATTTAAAATACGGGACATGGAAGATTTTAGTGATTTCTTTGAGGATTCAGGGGAAATTGGAGAAAAAGTTTTTCCGGTTGAAGTGAAGAAATACGGCAACCTCAAAAGACTATGGGAGGACAGAAAGGTAGTTGTACCAACCCGATCCCAAAATCCAGAGATGATATTATCCCTAAACCCTAAAGGGGAAATGGAGACGTCCTCCAAATAG 2517 0.3957 PELLQAIQGSRLFLTLFSKNYAFSTWCLRELAEICNCVETSPRRVIPIFYDVDPSDVRKQSGCYERAFAEHEERFREDKEKMEEVQRWREALTHVANLSGWDIRNKQQYAEIEQIVQNIINILRPNLLSLPNDDLVGIESRIEELANVLCLESVDDVRVVGISGMGGIGKTTLARALYERFSRQYDFHGFIDDGTSLVWSRLHSTKTFVVLDNVDDVEQLRMFTGNRYTLLRECLGGGSRIIIISRDEHVLRTHGVDDVYQVRPLTEKNAVELFCRHAFKVNYIMSEYEGLARDVLSHAEGHPLAIKVIGSSLFGRNASQWKGALGRLKENKSRNIMDVLRISFDQLDEGDRNIFGYCLLLLQQVYCTRKSPKEPIKWSRLWDFQDLHNALLDNQPLHNLKRLVLPFSKTLVEIPDIGDALNLEWLDLEACRQLKKINPSVGLLRKLAVLNLKNCINLVSLPKNLLGLTSLEYLSVSGCSKLYNNQLLYEGWNGEHSKKLCLVEAAFHSETKSSLIKNMFSWPLDLLYSRAQRESVSCLTPSSPTLCCLRELNLSFSNLVHIPDAIGKLHCLEKLYLKGNNFVMLPSLKDLFRLYNLNLQHCTRLKYCPDLPSRIDLPSKRYFSVLPYSPTINVLHVVQHDEVNGGLNIFNCPDLVDRERCTSMAASWMINIVQANHQHRCLPSSFMGPNVGSIIPGSEIPRWFNSEHVSTDNSIIIDASPVAQDNYWIGVVCCVIFQIRKMTSPTKTPLSGDKIPVDGIPNIDGLKLKFKIRDMEDFSDFFEDSGEIGEKVFPVEVKKYGNLKRLWEDRKVVVPTRSQNPEMILSLNPKGEMETSSK 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00782 838 SMART till_3 1 98 IPR000157 GO:0007165
Spst11g00782 838 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 101 IPR035897 -
Spst11g00782 838 Pfam TIR domain 1 123 IPR000157 GO:0007165
Spst11g00782 838 ProSiteProfiles TIR domain profile. 1 123 IPR000157 GO:0007165
Spst11g00782 838 Gene3D - 264 348 IPR042197 -
Spst11g00782 838 Gene3D - 126 194 IPR027417 -
Spst11g00782 838 Pfam NB-ARC domain 202 334 IPR002182 GO:0043531
Spst11g00782 838 Pfam NB-ARC domain 139 186 IPR002182 GO:0043531
Spst11g00782 838 Gene3D Ribonuclease Inhibitor 509 657 IPR032675 -
Spst11g00782 838 Gene3D Ribonuclease Inhibitor 374 490 IPR032675 -
Spst11g00782 838 SUPERFAMILY L domain-like 388 621 - -
Spst11g00782 838 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 485 IPR044974 GO:0006952
Spst11g00782 838 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 117 358 IPR027417 -
Spst11g00782 838 PRINTS Disease resistance protein signature 159 174 - -
Spst11g00782 838 PRINTS Disease resistance protein signature 299 313 - -
Spst11g00782 838 PRINTS Disease resistance protein signature 442 458 - -
Spst11g00782 838 Gene3D - 195 259 IPR027417 -
Spst11g00782 838 Gene3D - 1 125 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00782 Spst-Chr11 31578612 31593698 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00782 394 587 WRKY Transcription Factor Family AT4G12020 34.872 3.80e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00782 - - adu:107476580 601.282