Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00781 ATGACTTCTGATGCTATCATCCAATACACCTCTTCTTCATCTCACACGATGAGGACACATGATGTGTTTGTGAGCTTCCGTGGGGAAGACACTCGCTACAGCTTCACTGGATTTCTCTTTGAAGCTCTTGGTAGAAAGGGCGTTGATGCCTTCAGAGATCATACACATCTCCAGAAAGGGGAATCCATAGCACCCGAGCTGCTGCAAGCAATTGAAGGGTCTCGTGTTTTCGTTGTGGTCTTCTCAAAGAACTATGCTTCCTCAACATGGTGCTTGCGTGAACTTGCGCACATCTGCAATTGCATTGAAACACCACAAAGACCCGTTCTGCCTATCTTTTATGATGTGGATCCGTCAGATGTGCGAAAACAAAGTGGATATTATGAGAAGGCCTTTGCTGAACATGAAGAAAGATACAGAGATGATAAAGAGAGGATGGAAGAAGTTCAGAGATGGAGAGAAGCTCTCACACGCGTGGCCAATTTATCTGGCTGGGATATCCGAAACAAGTACGCAATCCTCTCACATTTCACCATGGATCTTAATTTATTATGTATCTGTGCAATTCCATGTATTTCATCAATTTTTAGTGAATTGTGTTTGATTTTCGTGAGTGATTATTTGACATTCTTTATATTCTTCTTTTATTGTAGGCCACAATATGCAGAGATTGAAAAAATTGTTAAAAGTATACTGAACATGTTGGGTAATAAATTTTCATGTCTTCCAAATGATAATCTAGTTGGAACGGAATCTCGTGTTGAAGAATTAGCAAATCTATTATGTTTGGAGTCTGATAATGACGTTCATGTAGTTGGAGTTAGTGGGATGGGTGGTATAGGAAAGACAACTCTTACTCGAGCTTTATACGAAAGAATCTCTTGTAAATTTGATTTTTGTTGTTTTATTGATGATGTAAGCAAACTTTATCAAGAGTCTAGTACATTAGGTGTACAAAAACAGTTACTTTCTCAGTGTCTAAATGAAAAACAATTAGAGATTTGCAATGTTTCCAAAGGAACATGTTTGGTATGGACTAGGCTACGAAATGGTAGGGCCCTTATTGTTCTGGATAACGTTGATCATGTTGGACAACTAAAGATGTTTACAGGGAACAGAGAGAATCTGTTACGTGAAAGCTTGGGTGGTGGGAGCAGAATCATTATAATTTCTAGGGATGAACATATATTGAGGACACATGGAGTAGATTATGTTTATCAAGTTCGGCCATTGAATCTCACAGATGCTGGTCGACTGTTTTACCATCATGCTTTCAGGAGTAATTATGTAAAGAGTGGTTATGAAGAGTATGCAAACGTTATATTATCATATGTTCAAGGCCATCCCTTGGCAATTGAAGTATTGGGCTCATCTTTGTTTGGTCGAGGTGTCTCACAGTGGAGAAGTGCATTGGCTAGGCTACGAGATTACAAAAGTAAAGATATAATGGATGTGTTGCGAATAAGTTTTGATCAGCTGGATGATACAGAAAAGGAAATATTTTTAGACATTGCTTGCTTCTTGAATTATAGAGAAGTGGAATATGTGAAGGAAGTTCTAGAATTTCGAGGATTTCATCCTGAATATGGTCTACAAGTTCTCATTGATAAATCACTCATTAAATATGAGCGTGATTGGAAATGTTTGTCGATTATGATGCATGAGTTGTTGGTAGATTTGGGCAGGTGTATTGTTCGAGATAAGGCACCTAAAGAGCCTAGAAAGAGGTGTAGGTTGTGGGATTACAAAGATCTCCACAAAGTGATGTCTGACAATACGGTAGCAGAAAATCTTGAAGCCATACAAGTTACAAAATGGACCACGGAATCAATAAGGGCTGACGGTCTCTCCAAAATGAATTATCTTCAGTATCTCAATCTTGAGGGTGTGATTTTTTCCGGAGAACTCAATCATCTATCCAAAGAATTAGGATATCTTAATTGGGATAATTATCCTTTTGAGTGTTTACCTCAAACTTTTCAGCCAGAGAAACTTGTGGAGTTGTCCCTCATTGACAGCAACATCAAACAACTATGGGAAGGCACAAAGCCTTTACCCAATTTGAGACGTTTGGATCTCTCTCATTCGGAAAATCTAACGGGCATACCAAATCTGTGTAAGGCCCTAAATCTTGAAGCAGTAAGTCTAGAAGGATGTGTACAACTCAAGCACATCGATCCATCCATTGGTTTTCTAACAAAGCTTACTGTTTTGAATTTGAAAGACTGCAAAAGTCTTGCCATGTTACCACATTTTGAAGAGGCTATAAATCTTGAAAACCTGAATCTCCAAGGATGTACCAAACTTAAGCAGATAGATCTATCCATTGGTCTTTTAAAAAGGCTTACTCTTTTGAATTTGAAAGGCTGCAAAAACCTAGTAAGCTCACCCAACAGTAAATTGGGCCTCAAATCTCTTCAATATCTGGGTATCACGGGTTGTTCAAAACGGTTTAATACCAAATTATTAGATGAACCAAGTAACCAGCTTTTGAAGATGCAGTGTGAAGGTGAAGAAGCTCCTGCTAATTCCCAATCATCATTCTCATTCGTCAAAATGTGGCCTTTAAATTTATTCTATTCCAGAGCTCGTAAAGACACATCTAGTGTTTTATTTCCTTCCTTATTTGGCTTCCCATGTATGCGTGATCTTGATCTAAGTTTCTGCAATCTACTTCAAATCCCTGATGCTATTGGAAACTTACATAGCTTAGAAAGGTTAAATGTAAGTGGGAACAATTTTGCTACACTGCCCAACCTCAAGGAGCTTTCCAAACTGTATTATCTAAACCTACAGCATTGCAAGCGGTTAAAATATTTGTGTGAACTTCCTTCACGAACTGAGTTGCCATCACTACCTAGTGAAAGTTCACCTTATGTAATTGAAGCAGGATTATATATTTTCAACTGCCCAGGATTAGTTGAGAGGGAACACTGCACAAACAAGGGATTTTCATGGATGATACAACTTATTCAGGCGCTCCACAAATACAATATTTCCAAGTGCGGGTACCAAATATGGCCTCCATTAATTTCAAGTATTATTCCAGGAAGTGAAATACCAAGGTGGTTTCACAATCAACATGTGAGCATGGGCAATTTAATAACCATAGAGGCATTTCCCATTGGAAATCGTGTTGGCGGCGTTGCTTGTTGTGTAGTATTCCCAGCTTGTTCCGAAGAAAGAGTTTTATGGATGCCTCCAAATAGCATAAGAAGTGGTAATTATGTTGCAGAAATTCCGGTGGATCTAGATGTTGATATAGTCTCGGACAAATCAGATCACATGTGGTTGTTCTATTTAGTTGGACACAATTGCAGATTGTCAAAATTTGAAATTGATGTAATAGACAGACAAGGTTTTACTGTTCAGGTGAAGAGATACGGGTATAGTTGGGATACGTATTTGACAACGAGGAATAGTGGAAATTCATCAGGTCAGAAACGCAAGTTTTCGATGATTGAAGAAAAATAA 3474 0.3837 MTSDAIIQYTSSSSHTMRTHDVFVSFRGEDTRYSFTGFLFEALGRKGVDAFRDHTHLQKGESIAPELLQAIEGSRVFVVVFSKNYASSTWCLRELAHICNCIETPQRPVLPIFYDVDPSDVRKQSGYYEKAFAEHEERYRDDKERMEEVQRWREALTRVANLSGWDIRNKYAILSHFTMDLNLLCICAIPCISSIFSELCLIFVSDYLTFFIFFFYCRPQYAEIEKIVKSILNMLGNKFSCLPNDNLVGTESRVEELANLLCLESDNDVHVVGVSGMGGIGKTTLTRALYERISCKFDFCCFIDDVSKLYQESSTLGVQKQLLSQCLNEKQLEICNVSKGTCLVWTRLRNGRALIVLDNVDHVGQLKMFTGNRENLLRESLGGGSRIIIISRDEHILRTHGVDYVYQVRPLNLTDAGRLFYHHAFRSNYVKSGYEEYANVILSYVQGHPLAIEVLGSSLFGRGVSQWRSALARLRDYKSKDIMDVLRISFDQLDDTEKEIFLDIACFLNYREVEYVKEVLEFRGFHPEYGLQVLIDKSLIKYERDWKCLSIMMHELLVDLGRCIVRDKAPKEPRKRCRLWDYKDLHKVMSDNTVAENLEAIQVTKWTTESIRADGLSKMNYLQYLNLEGVIFSGELNHLSKELGYLNWDNYPFECLPQTFQPEKLVELSLIDSNIKQLWEGTKPLPNLRRLDLSHSENLTGIPNLCKALNLEAVSLEGCVQLKHIDPSIGFLTKLTVLNLKDCKSLAMLPHFEEAINLENLNLQGCTKLKQIDLSIGLLKRLTLLNLKGCKNLVSSPNSKLGLKSLQYLGITGCSKRFNTKLLDEPSNQLLKMQCEGEEAPANSQSSFSFVKMWPLNLFYSRARKDTSSVLFPSLFGFPCMRDLDLSFCNLLQIPDAIGNLHSLERLNVSGNNFATLPNLKELSKLYYLNLQHCKRLKYLCELPSRTELPSLPSESSPYVIEAGLYIFNCPGLVEREHCTNKGFSWMIQLIQALHKYNISKCGYQIWPPLISSIIPGSEIPRWFHNQHVSMGNLITIEAFPIGNRVGGVACCVVFPACSEERVLWMPPNSIRSGNYVAEIPVDLDVDIVSDKSDHMWLFYLVGHNCRLSKFEIDVIDRQGFTVQVKRYGYSWDTYLTTRNSGNSSGQKRKFSMIEEK 1157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00781 1157 SMART till_3 19 162 IPR000157 GO:0007165
Spst11g00781 1157 Pfam TIR domain 20 165 IPR000157 GO:0007165
Spst11g00781 1157 Gene3D - 12 179 IPR035897 -
Spst11g00781 1157 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 807 IPR044974 GO:0006952
Spst11g00781 1157 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 230 504 IPR027417 -
Spst11g00781 1157 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 177 - -
Spst11g00781 1157 Pfam Leucine Rich Repeat 664 683 IPR011713 -
Spst11g00781 1157 PRINTS Disease resistance protein signature 445 459 - -
Spst11g00781 1157 PRINTS Disease resistance protein signature 683 699 - -
Spst11g00781 1157 PRINTS Disease resistance protein signature 271 286 - -
Spst11g00781 1157 PRINTS Disease resistance protein signature 347 361 - -
Spst11g00781 1157 Pfam NB-ARC domain 251 481 IPR002182 GO:0043531
Spst11g00781 1157 SUPERFAMILY L domain-like 616 954 - -
Spst11g00781 1157 Gene3D - 213 404 IPR027417 -
Spst11g00781 1157 SUPERFAMILY "Winged helix" DNA-binding domain 481 589 IPR036390 -
Spst11g00781 1157 Gene3D Ribonuclease Inhibitor 754 835 IPR032675 -
Spst11g00781 1157 Gene3D Ribonuclease Inhibitor 595 753 IPR032675 -
Spst11g00781 1157 Gene3D Ribonuclease Inhibitor 857 1035 IPR032675 -
Spst11g00781 1157 ProSiteProfiles TIR domain profile. 18 179 IPR000157 GO:0007165
Spst11g00781 1157 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 165 IPR035897 -
Spst11g00781 1157 Gene3D - 411 494 IPR042197 -
Spst11g00781 1157 ProSiteProfiles Leucine-rich repeat profile. 903 924 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00781 Spst-Chr11 31574542 31578331 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00781 268 940 WRKY Transcription Factor Family AT5G45050 32.097 2.83e-75 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00781 - - gmx:100790778 1167.91