Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00773 ATGGTCAACAACGCCAAAAGCCAAGCTCTTGGTTGGGCTTGGGGGTTCAACTCTGTAAGGTACTGGGTGGTGTTCTGTGGAAGAATTGAAGTGGTTTGTGAAAAGAAGGTTCTTTTTCGTTGGCGGTCAGCAGTCAGCCCATTGGAGAAGAAGGAAACTGAAGATGATTTTCTTAGGAGGTTAGCTAATCCAGAATCTGGATTGTTTGATGAACAGACGGCAAATATCTTATGGACATATTGCAGGGAAGATTTATTTCATTTAATCAAAGATGTTGAGAATTCCGATTTATGCCTTTCAAGGGAATTATCTGGAATCACCAATACAATCAGTTCAAAGATTCAACCATTAGCACAAGAAGAAATCCAAAAGTTTATCAATGCTTACTGTCCGCAATTCAAGGAGAACATTCTTCACTGTTTGAGAAAAAATAATCTTCCATTACCTGTTTCAAGAAAAGAGGATGATTCCAAGATTTGGCATGTCATTTGTTCGGGACCACTTTTTTCGAGAACCAGTGTTCCTGCAAGAAATTTTGGTCGCATTTTGCTCCAGCACATATCAGTAGCACTTAGCCCAGGCCCTGCACCCAGTTTAACACCATCTTCTGAACCCAGTCCAGCACCATCTTCTGAACCCAGTCCAGCACCATCTTCGGGACCCAGTCCAGCCCCATCATCTGAACCCAGTCCAGCCCCATCACCTCATGCTCCCACACCTCATCATCTTCCTGGACTGCTGCAACCTTCTTTCGCACCAACATCTTTTTTCCCAAAATTGACACCTCCAGCAGCTTCAGATATTTCTGCTCCTCCATCTTCGGACATTCTCAAACAGGAAAATAATCATAGTAATAAAAAAACAGTTGTTCTTGCTGTAGTTATAACTGCATTGGTTACATTTATAGCTGCAGCACTTCTCTTTTTATGCTGGAGCCGGTATCGTAAGACTGGCCATGTTAGACTAAATGATGATAGGCCTCTTCTTAGCTTGAGCATGAGTGACTACTCTGTTGGTATGTATTATGTTACCATTCATTTGTACCTTGTTATAATATGTTGTACTAGTCTTGACAAAGTGGACTTTTATCTTACAGGTCCTTCCAGTTATTCTTTTGGAAATTCAGTGAAAGGGGAGAAACTTGCGTTTCAGTCATCTAGTAATAGTTTAGTAGAGAATAAGAAGTACTCGGTGCAAGAAAGTCAGTCAATAGGAGCTCTTAATGCTGCTACAGGATCACCATTTGAACTGAAACCTCCTCCCGGGAGGCTAGGAATCATCCCTTCTGGAATGCCTCCTTTAAAACCTCCTCCGGGCAGGTTAAACCCTCTTCCTCCTGAACCACCTTCATTTAGGCCCTCTGGTAATACTGCCCCGGCATCTACTACTGCCATTGCTGCTGCTGTTCCTCCTCGTGCCCCTCAAAGGCCTGCCATGAGTAGCATTCCACCACCCCAACTGCCAATGGGTGCCAAACCTAGCCCGCCCCTACCACCACCACCAGCACTAGCTGGTTCCAGACCAGGTCCTCCTCCACCACCTCCAGCACCAGCTGTTTCCAGACCTGGTCCTCCTCCTCCACCACCTCCAGCACCAGCTCGTGTCAAACCTGGTCCTCCTCCGCCACCACCCCCAGTACCAGGTGGTGCCAAACCTGGTCCTCATCCACCACCACCTCCTATGAATGGTGTAGCTCCTCCTCGACCTCCTCCATTTGGCTCAAAGGTGCCACGGCCTTTGGCCAGTGGATCAAAAGCTGCAGTGGAAGCCAGTGTTGAAGGTGATGCTGATGCTCCCAAAGCCAAGCTAAAGCCCTTCTTCTGGGATAAGGTTCAAGCAAACCCAGATCAATCGATGGTTTGGAATCAAATCAAATCAGGATCATTCCAGTAA 1893 0.4617 MVNNAKSQALGWAWGFNSVRYWVVFCGRIEVVCEKKVLFRWRSAVSPLEKKETEDDFLRRLANPESGLFDEQTANILWTYCREDLFHLIKDVENSDLCLSRELSGITNTISSKIQPLAQEEIQKFINAYCPQFKENILHCLRKNNLPLPVSRKEDDSKIWHVICSGPLFSRTSVPARNFGRILLQHISVALSPGPAPSLTPSSEPSPAPSSEPSPAPSSGPSPAPSSEPSPAPSPHAPTPHHLPGLLQPSFAPTSFFPKLTPPAASDISAPPSSDILKQENNHSNKKTVVLAVVITALVTFIAAALLFLCWSRYRKTGHVRLNDDRPLLSLSMSDYSVGMYYVTIHLYLVIICCTSLDKVDFYLTGPSSYSFGNSVKGEKLAFQSSSNSLVENKKYSVQESQSIGALNAATGSPFELKPPPGRLGIIPSGMPPLKPPPGRLNPLPPEPPSFRPSGNTAPASTTAIAAAVPPRAPQRPAMSSIPPPQLPMGAKPSPPLPPPPALAGSRPGPPPPPPAPAVSRPGPPPPPPPAPARVKPGPPPPPPPVPGGAKPGPHPPPPPMNGVAPPRPPPFGSKVPRPLASGSKAAVEASVEGDADAPKAKLKPFFWDKVQANPDQSMVWNQIKSGSFQ 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00773 630 MobiDBLite consensus disorder prediction 198 242 - -
Spst11g00773 630 MobiDBLite consensus disorder prediction 194 245 - -
Spst11g00773 630 MobiDBLite consensus disorder prediction 476 576 - -
Spst11g00773 630 ProSiteProfiles Formin homology-2 (FH2) domain profile. 593 630 IPR015425 -
Spst11g00773 630 MobiDBLite consensus disorder prediction 411 599 - -
Spst11g00773 630 MobiDBLite consensus disorder prediction 425 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00773 Spst-Chr11 31469139 31472945 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00773 574 630 FH2 protein (formin) Gene Family AT5G67470 47.368 2.72e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00773 - - pvu:PHAVU_011G141900g 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00773 11 31469139 31472945 Spst11g00773 11 31469139 31472945 ECH
Spst5g00997 5 9664472 9667885 Spst11g00773 11 31469139 31472945 PCT