Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00772 ATGATAGAGACGCTTTTTGGCTATAATGCTATGGATAAGAACAATGGTCAAAGACAGAAAGAGCCTTCCTCCCAGGATCCTTCACCCCAGTTTGTCCAGATCATTGACAAAAAGAAAGCACAAAATTTATTGATTCTGTTGCGAGCATTGAATGTGACAATGGAAGAAGTTCGTGATGCACTTTATGAAGGACACGAACTACCCTCAGAATTCCTTCAAACTTTGCTAAAGATGGCACCAACATCAGATGAAGAACTTAAGCTCAGACTTTTTAGTGGTGATCTATCTCAACTTGGACCTGCTGACAGTTTCCTCAAGGCCCTGGTTGACATTCCATTTGCATTCAAGAGAATGGAAGCTCTGCTGTTCATGGGCTCATTTAAAGAGGAGCTTGGAACTACTATGGAGTCTTTTTCTATTTTGGAGGTATTATTGATCGTAATCTTATTCTACGTGCAACTGTATGTGATATGTCAGGTTGCTTGTAAGGAACTAAGAAGTAGCCGGCTGTTCCTGAAGCTTCTTGAAGCTGTTCTCAAAACTGGCAACCGAATGAATGATGGAACATTCCGTGGTGGTGCACAAGCATTTAAACTTGACACACTTCTGAAATTATCCGATGTAAAAGGAACAGACGGGAAGACTACACTCTTACACTTTGTTGTTCTAGAGATTATCCGCTCTGAGGGCATAAAAGCCGTCCGAAAGGCAAAAGATAGCCAGAGTATATCCAGTGATGACCTTCAGGTTAGTACTCAAGAAACAGAAGAAGCTCAATACCATGAAATTGGCCTTCAGGTGGTTTCAAACTTGAGCAGTGAACTTGAGAATGTAAAAAAAGCATCAGTTATAGATGCTGACATCTTAACAGGAACCACTGCCAAACTTGGCCATGGTCTTGTAAAAACACAAGACTTGATAAGCAAAAACATGAAGAATGTGGAGGAAGACAGGGGGTTTTGTGAGACGGTGAGAAGTTTCGTGCAGAATGCTGAGGCTGATGTTAAGAAACTGCTGGAAGAGGAGAAGAGGATTATGGCTTTGGTGAAGAACACTGGTGATTACTTTCATGGGAATGCTGGGAAGAATGAAGGCATAAGGTTGTTCATAGTAGTACGGGACTTCTTAGTGATGCTGGATAAGGTGTGCAAGGAGGTGAGAGACACACAGAAGAGGCAAGCAAAAACAGTAAAACAAGAGAATACGCGAGGATCATCTTCCTCTGAAACACATCCACCACCTGATTTTCGACAGCGGCTTTTTCCGGCAATTGCTGAAAGGAGGATGGAAGACATTAGTTCAGATGACGAGGGTCCATAG 1320 0.4227 MIETLFGYNAMDKNNGQRQKEPSSQDPSPQFVQIIDKKKAQNLLILLRALNVTMEEVRDALYEGHELPSEFLQTLLKMAPTSDEELKLRLFSGDLSQLGPADSFLKALVDIPFAFKRMEALLFMGSFKEELGTTMESFSILEVLLIVILFYVQLYVICQVACKELRSSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVLEIIRSEGIKAVRKAKDSQSISSDDLQVSTQETEEAQYHEIGLQVVSNLSSELENVKKASVIDADILTGTTAKLGHGLVKTQDLISKNMKNVEEDRGFCETVRSFVQNAEADVKKLLEEEKRIMALVKNTGDYFHGNAGKNEGIRLFIVVRDFLVMLDKVCKEVRDTQKRQAKTVKQENTRGSSSSETHPPPDFRQRLFPAIAERRMEDISSDDEGP 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00772 439 Coils Coil 328 348 - -
Spst11g00772 439 SMART it6_source 2 394 IPR015425 -
Spst11g00772 439 Pfam Formin Homology 2 Domain 159 379 IPR015425 -
Spst11g00772 439 Pfam Formin Homology 2 Domain 2 142 IPR015425 -
Spst11g00772 439 MobiDBLite consensus disorder prediction 399 413 - -
Spst11g00772 439 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 405 IPR015425 -
Spst11g00772 439 PANTHER FORMIN-RELATED 1 435 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Spst11g00772 439 Gene3D Formin, FH2 domain 1 411 IPR042201 -
Spst11g00772 439 SUPERFAMILY Formin homology 2 domain (FH2 domain) 29 406 - -
Spst11g00772 439 MobiDBLite consensus disorder prediction 389 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00772 Spst-Chr11 31466916 31469048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00772 1 430 FH2 protein (formin) Gene Family AT5G54650 61.556 2.99e-174 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00772 - - gmx:100793413 703.36