Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00771 ATGGAGAAGGAAGAAAAAAAGAAGATAAAGGGAAGCATTAAGGATAATATGCCAACAGTTTGGTTCTCTCTGAAGAAGTCTTTACACTGCAAATCTGAGCCATCTGATGTTCATGACCCCAAAACAAGGAAGCACTTGAGCACAATCTTGACCAAGAGAGCAGGGAGGTCAGGGTGTTCCAGGTCCATAGCAAATCTCAAGGATGTGATCCACGGAAGTAAGAGGCATCTTGATAAGCCACCAAGTTGCAGTCCAAGATCCATAGGGAGCAGTGAATTCCTCAACCCCATAACTCATGAGGTGATTTTGAGCAACTCAAGGTGTGAGCTGAAAATAACTGGGTATGGAGGCTTCCAAGAAGGGGTTGGCAGTGGTGGCAGCAATGCTGGTGGAGGTAGCGGTGGCTCAACTTTTGTGGGGACTTTGAGGCCAGGGACTCCTGGCCCTGGAGGGCACCCTACGATGCACTACTTTAACCCTTCTTTTAGGACCTCATCCACTCCTCCAAGGAAATCTCCTTTCCTCTTATCAGATAAAGAAGGGTCTGGTCCTCATTGTGCTGGACTTCATCCTAGCAATAGGTTGTCTAGTGAAACAGATTCTAATGGGTCTTCGACTGTGACTTGCCACAAATGTGGAGAACAATTCAACAAATGGGATGCTGCTGAAGCTCATCATCTGTCTAAGCATGCTGTTACTGAACTTGTGGAAGGAGATTCATCAAGGAAAATAGTGGAGATCATATGCAGAACTAGCTGGTTAAAGTCTGAAAATCAGTGTGGCAGAATTGAGCGAGTTTTGAAGGTGCACAACATGCAAAAGACTCTTGCAAGATTTGAAGAGTACAGGGAGATGGTGAAGATCAAAGCCAGCAAACTCCAGAAGAAGCATCCAAGATGTCTGGCCGATGGAAATGAGCTTTTGAGGTTCTATGGCACCACTGTGGCGTGCTCTCTTGGCCTTAACGGCTCTTCTAGTCTCTGCCTATCAGAAAAGTGCTGTGTTTGCAGAATCATAAGGAATGGTTTTTCAGCCAAGAAGGAGCTCAAGGGTGGCATCGGAGTCTTCACAACATCTACAAGTGGAAGGGCTTTTGAGTCCATAGAGATTTTTGGTGATGAACCATCGCAGAGAAAAGCACTCATAGTGTGCAGAGTAATTGCTGGCAGGGTTCATAGGCCACTCGAGAACATTCAGGAAATGGCAGCACAAACAGGATTTGACTCATTGGCTGGGAAAGTTGGTCTATATTCAAACATTGAGGAGCTTTATTTGCTCAATCCTAGAGCTCTTCTTCCTTGCTTTGTTGTGATTTGCAAACCTTGA 1326 0.4548 MEKEEKKKIKGSIKDNMPTVWFSLKKSLHCKSEPSDVHDPKTRKHLSTILTKRAGRSGCSRSIANLKDVIHGSKRHLDKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGYGGFQEGVGSGGSNAGGGSGGSTFVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKSPFLLSDKEGSGPHCAGLHPSNRLSSETDSNGSSTVTCHKCGEQFNKWDAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENQCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELLRFYGTTVACSLGLNGSSSLCLSEKCCVCRIIRNGFSAKKELKGGIGVFTTSTSGRAFESIEIFGDEPSQRKALIVCRVIAGRVHRPLENIQEMAAQTGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVICKP 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00771 441 MobiDBLite consensus disorder prediction 158 172 - -
Spst11g00771 441 MobiDBLite consensus disorder prediction 126 204 - -
Spst11g00771 441 SUPERFAMILY ADP-ribosylation 232 440 - -
Spst11g00771 441 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 20 439 - -
Spst11g00771 441 Gene3D - 221 440 - -
Spst11g00771 441 ProSitePatterns Zinc finger C2H2 type domain signature. 209 230 IPR013087 -
Spst11g00771 441 FunFam C2H2-like zinc finger protein 231 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00771 Spst-Chr11 31458192 31460023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00771 17 441 C2H2 Transcription Factor Family AT5G54630 68.898 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Spst11g00771 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00771 - - gmx:100787790 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00771 11 31458192 31460023 Spst11g00771 11 31458192 31460023 ECH