Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00769 ATGGAATTGAATCAGTTTTTAAGTGTCAGCGTGACTAGTTCAGCAGGAATCCCTAGCACATCATCTTATACACCTACTTCACCAATACCCAACCGGTTGCTTGGATCCTTGAAACACGACATAGGATACTCACCTAATTCGGCCCTTTCTACTCATTTTGATTCTGATGCTCTTTCCTCTGCGCTAAGTGACAGCCAAGAACAACACACCTCTGGGGAAATTCACTCTGGTGTAAGCTCTTTGCAGGATCATTATTTGCATAGGCCAGTCTCATCTGTGGACCATCTCCAGGACGGTTTGAAACTATCTACTAGGTCCTTTCTTCCGCAGGATATAAGTTATGACCATGAAACCAGGTATGCATTGCTGGAATTAGAAACTTCTTTGATGGCACCTGATGGTGATGATCAAGTCACCACATCAAGTACTTCTTTGGGTGTGAGCAGAAGGCATACAACATATGGCCAGAGAAATAGGTCCTGGAGCCATGAGGGTCAGCCAAGTGATGTTGCACGTGTAGATAAGCATCACAAATCAACAGAGGAAGTATTGCTACAAGAATTCCCGTTAACCAATTTGAAACAATTGCTGATTGTATCCGCCAAAGCCTTGTCCGAAAACAACATGAAAGATTTTGATCAATTGATAGAAAAGGCTAGAACTGTTGTGTCTATAACTGGGGAGCCAATCCAGCGCCTTGGTGCTTATTTGGTGGAAGGGCTTGTTGCAAGGAAGGAGGCATCAGGGAATAACATTTACCATGCCCTTAGATGCAGTGAGCCTGAGGGAAAAGACTTGCTCTCTTACATGCAGTTACTGTATGAAATATGCCCCTACTTAAAATTTGGTTACATGGCTGCCAATGGTGCTATTGCTGAAGCTTGTAGAAATGAGGACCACATTCATATCGTAGACTTTCAGATAGGTCAGGGGATTCAATGGATGACACTTCTTCAAGCTCTTGCAGCAAGACCTGGTGGAGCTCCTCATGTGCGGATCACAGGGATTGATGACCCCCTTTCTAAATATGTTCGTGGTGACGGATTGGAAGCTGTTGGAAAAAGGTTGGCTGAAATATCTCAGACATTTAACATCCCAGTTGAGTTCCACAGTGTGCATGTTTTAGCTCCAGATGTGACAAAAGACATGCTTGATGTTAGGCCTGGTGAGGCTTTGGCCGTGAATTTCCCTTTGCAACTCCATCACACGCCTGATGAGAGTGTCGATATGAGTAATCCAAGGGATGGGCTTTTGAGATTGGTGAAATCACTTTCTCCCAAGGTAACTACGTTGGTTGAGCAAGAGTCGAACACAAATACCACCCCTTTCTTCAACAGGTTTATAGAAACATTGGATTACTACTTGGCAATTTTTGAATCCATTGATGTGTCTCTTCCAAGAAAGAGCAAGGATCGGATTAATGTGGAGCAACATTGTCTGGCACGGGATATTGTCAATGTTATTTCTTGTGAAGGGAAGGAAAGGGTAGAGCGACACGAACTGTTAGGCAAGTGGAAGTCTAGGTTGACAATGGCTGGCTTTTCTCAATATCCTTTGAGTACTTACGTGAATTCTGTCATAAGAAGACTGCTTAGGTGCTATTCAGAACATTATAATCTTGTGGAGAAGGATGGGGCCATGTTGTTGGGATGGAAGGACAGAAATTTGGTTTCAGCTTCAGCATGGCATTGA 1692 0.4362 MELNQFLSVSVTSSAGIPSTSSYTPTSPIPNRLLGSLKHDIGYSPNSALSTHFDSDALSSALSDSQEQHTSGEIHSGVSSLQDHYLHRPVSSVDHLQDGLKLSTRSFLPQDISYDHETRYALLELETSLMAPDGDDQVTTSSTSLGVSRRHTTYGQRNRSWSHEGQPSDVARVDKHHKSTEEVLLQEFPLTNLKQLLIVSAKALSENNMKDFDQLIEKARTVVSITGEPIQRLGAYLVEGLVARKEASGNNIYHALRCSEPEGKDLLSYMQLLYEICPYLKFGYMAANGAIAEACRNEDHIHIVDFQIGQGIQWMTLLQALAARPGGAPHVRITGIDDPLSKYVRGDGLEAVGKRLAEISQTFNIPVEFHSVHVLAPDVTKDMLDVRPGEALAVNFPLQLHHTPDESVDMSNPRDGLLRLVKSLSPKVTTLVEQESNTNTTPFFNRFIETLDYYLAIFESIDVSLPRKSKDRINVEQHCLARDIVNVISCEGKERVERHELLGKWKSRLTMAGFSQYPLSTYVNSVIRRLLRCYSEHYNLVEKDGAMLLGWKDRNLVSASAWH 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00769 563 ProSiteProfiles GRAS family profile. 184 563 IPR005202 -
Spst11g00769 563 MobiDBLite consensus disorder prediction 133 169 - -
Spst11g00769 563 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 146 559 IPR005202 -
Spst11g00769 563 MobiDBLite consensus disorder prediction 133 165 - -
Spst11g00769 563 Pfam GRAS domain family 193 562 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00769 Spst-Chr11 31421277 31422968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00769 116 562 GRAS Transcription Factor Family AT5G48150 56.473 3.21e-176 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst11g00769 GRAS 1.1e-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00769 - - gmx:100775665 970.304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00769 11 31421277 31422968 Spst11g00769 11 31421277 31422968 ECH
Spst5g01007 5 9783959 9785689 Spst11g00769 11 31421277 31422968 PCT