Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00762 ATGGGTGGCATAGGAAAAACAACTCTTGCTCGCGCTTTATATGAAAGATTCTCTCATCAATATGATTTTCATGGTTTCATTGATGAAGTAAGCAAAATTTATCAAGATTCAAGTTCATTTGGTTTACAGAAGCAGTTACTTTCCCAGAGTCTAAAGGAGAAAAATCTAGAGATTTGCAATGCTTCGGAGGGAACATGTTTGGTGTGGACCAGGCTACACAATGCGAAGGCACTTGTTGTTTTTGACAATGTTGATGACATTGAACAACTAAGGATGTTTACAGGGAACAGAGACACTATGTTGCGTGAATGTTTGGGTGGAGGGAGCAGAATCATCGTAATTTCCAGGGATGAGCATGTATTGAGGACACATGGAGTAGATGATGTTTATAACGTCCGCCCTTTGACTGGAAAAAATGCTGTCGAGTTGTTTTGTAGAAATGCCTTCAGAGTTAATTATATTTTGAGTGAATATGAAGAATTGGCAGGTGAAGTTCTATCGCATGCTCAGGGGCATCCCTTGGCAATTAAAGTAATTGGCTCATCTCTGTTTGGTCGAAACGTATCACAATGGAAAGGTGCATTGGGTAGGCTCAAAGAGAATAAAAGTAGAAATATTATGGATGTTTTGCGCATAAGTTTTGATCAGCTGGATGAAGGAGACAAAGGAATATTTTTGGATATTGCTTGCTTCTTCTGCAGTGATTATAAAGAAAAATATGTGAATGAAGTTTTAAATTTCCGAGGATTTCATCCAGAATATGGCATACAAGTTCTGGTTGATAAATCACTCATAACTACTGATCATGGGTGGATTTATATGCATAGGTTGTTGAGAGATTTAGGCAAGTGTATTGTACGAGAAAAATCACCTAAGGAGCCTATAAAGTGGAGTAGGTTGTGGGATTTCCAAGATCTCCACAATGCCTTATTAGACAATCAGGCCACTGAAAACCTTGAAGCTATCGTTGTTTCAGGTGATAAGTTCAATAGGACTGTTAAACCGACAATGATGGCAGATGGTCTATCAAAAATTAAGCACCTTAAGTTGCTTCAACTTCAGTACTTGAACTTCTCCGGAAGTCTCAGTCATCTTTCGAATGAAGTAGGGTATCTTACATGGAAAGCATTTCCTTTTGAGTGTTTGCCTCAAAGTTTTCAACCAGATAAACTGATTGAGTTAAACCTTAGTGAGAGCAACATTCAACGACTATGGACAGGCAGAAAGCCTCTACACAATTTGAAACGTTTGGATCTCTCTTTCTCAAAAAATCTTGTTGAGATGCCAGATCTTGGAGACGCCCTAAATCTCGAATGGCTAGATCTTGAAGGATGCATACAGCTCAAAAAAATCAGTCCATCCATTGGCCTTCTGAGAAAGCTTGCTGTTTTGAATTTGAAAAACTGCATAAACCTAGTAAGCTTACCCAAGAACCTATTGGGCCTGACTTCTCTTGAATATCTCAGTGTCTCTGGGTGTTCAAAACTGTATAATAATCAGTTATTAGATGAAGGACGGAATGGAGAGCATTCGAAGAAGCTTTGTTTAGTTGAAGATGCTTTCCATTCCGAGACAAAATCCTCTTTTATTAAAAAAATGCTTTCGTGGCCTTTGGATCTGTTGTATTCCAGAGCACAGAGAGAGTCAGTTAGTTGTTTAACACCTTCCTCTCCTACTCTGCCTTGTTTGCGTGAACTTGATCTAAGTTTCAGTAACTTAGTTCATATCCCTGATGCCATTGGAAAGTTACATTGCTTAGAAAGGCTAAATTTAAAGGGAAACAATTTTGTTACGCTTCCCAGCCTCAAGGACCTTTTCAGACTCTATAATTTAAACTTACAGCATTGCACGCGCTTGAAATATTGTCCTGATCTCCCTTCACGAGTTGACTTGCCCTCAAGACGTTACAGTCTGTTCTTGCCATATTCACCTACTTTCAATTCACGTCCAGTTAAACACGACGAAGTTGTTGGAGGATTAAACATTTTCAACTGTCCAGAATTAGTTGATAGGGAACGGTGCACTAGCATGGGTGTTTCATGGATGATACAAATTGTTCAGGGAAACCAGCAACTAACGCATAACTCTGCTGTGCTACAAGGCGAACCACCAATGCAGATGTTTTCCAGTTAG 2133 0.3924 MGGIGKTTLARALYERFSHQYDFHGFIDEVSKIYQDSSSFGLQKQLLSQSLKEKNLEICNASEGTCLVWTRLHNAKALVVFDNVDDIEQLRMFTGNRDTMLRECLGGGSRIIVISRDEHVLRTHGVDDVYNVRPLTGKNAVELFCRNAFRVNYILSEYEELAGEVLSHAQGHPLAIKVIGSSLFGRNVSQWKGALGRLKENKSRNIMDVLRISFDQLDEGDKGIFLDIACFFCSDYKEKYVNEVLNFRGFHPEYGIQVLVDKSLITTDHGWIYMHRLLRDLGKCIVREKSPKEPIKWSRLWDFQDLHNALLDNQATENLEAIVVSGDKFNRTVKPTMMADGLSKIKHLKLLQLQYLNFSGSLSHLSNEVGYLTWKAFPFECLPQSFQPDKLIELNLSESNIQRLWTGRKPLHNLKRLDLSFSKNLVEMPDLGDALNLEWLDLEGCIQLKKISPSIGLLRKLAVLNLKNCINLVSLPKNLLGLTSLEYLSVSGCSKLYNNQLLDEGRNGEHSKKLCLVEDAFHSETKSSFIKKMLSWPLDLLYSRAQRESVSCLTPSSPTLPCLRELDLSFSNLVHIPDAIGKLHCLERLNLKGNNFVTLPSLKDLFRLYNLNLQHCTRLKYCPDLPSRVDLPSRRYSLFLPYSPTFNSRPVKHDEVVGGLNIFNCPELVDRERCTSMGVSWMIQIVQGNQQLTHNSAVLQGEPPMQMFSS 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00762 710 SUPERFAMILY L domain-like 274 626 - -
Spst11g00762 710 Gene3D - 135 218 IPR042197 -
Spst11g00762 710 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 497 IPR044974 GO:0006952
Spst11g00762 710 Gene3D - 1 127 IPR027417 -
Spst11g00762 710 Pfam NB-ARC domain 1 204 IPR002182 GO:0043531
Spst11g00762 710 Gene3D Ribonuclease Inhibitor 303 507 IPR032675 -
Spst11g00762 710 Gene3D Ribonuclease Inhibitor 537 669 IPR032675 -
Spst11g00762 710 PRINTS Disease resistance protein signature 71 85 - -
Spst11g00762 710 PRINTS Disease resistance protein signature 409 425 - -
Spst11g00762 710 PRINTS Disease resistance protein signature 169 183 - -
Spst11g00762 710 ProSiteProfiles Leucine-rich repeat profile. 585 606 IPR001611 GO:0005515
Spst11g00762 710 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 228 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00762 Spst-Chr11 31279587 31282028 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00762 340 500 WRKY Transcription Factor Family AT5G45050 33.728 1.30e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00762 - - vum:124845879 935.636