Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00755 ATGAGGGCAGATCCTATATCAAAAATTAAACACCTGAAGTTGCTTAATGTTGAAGACATGAACTCTTTAGGAAGTCTCAGTTACCTTTCGAATGAATTAGGATATCTTATTTGGAACAAATATGCTTTTGATTGTTTGCCTCCAAGTTTCCAGCCAGGCAAACTAGTTGAGTTGAATCTACGTGGGAGCAACATTGATCGATTGTGGCATGGCACAAAGCCTTTGCACAACTTGAAACGTTTGGACCTCTCTTTCTCCAAAAATTTAGTTGAGATGCCCGATCTTAGAGATGCACTAAATCTTGAAAGGCTAGCTCTTGAAGGATGTATAAAGCTCAGAAAAATCAATCCATCCCTTGGTCTTCTGAGAAAGCTTGCTGTTTTGAATTTGACAAACTGCATAAACCTAGTAAGCTTACCCAAAAGCATATTCGGCCTGACTTCTCTTCAATATCTCAGTGTTTCTGGCTGCTCAAAACTGTACAATAATGAGTTAATAGATGAACCAAGGAATGAAGAGAATTTAAAGAAGCTTTGTTTAGTTGAAGCTCCTATTCATTCCCAGTCAACATCCTCTTTGATAAAAAAGTGGCTTGTGAGGTGGCCTTTAGATTTGTTGTATTCCAGAGCACAAAGAGACTCGATTAGTTATTTGATACCTTCCTCTGCTACTCTCCCTTATTTGCGTGAACTAGATCTAAGTTTCTGTAACTTAGTTCAAATCCCTGATGCCATTGAAAAGTTACATTGCTTAGAAAAGCTAAATTTAAAGGGAAACAATTTTGTTACGCTTCCCAGCCTCAAGGACCTTTTCAGACTCTATAATTTAAACATACAGCATTGCAAGCGGTTGAAATATTTTCCTAATCTCCCTTCACGAACTCAGTTGCCTTCAGATGTTTACAGTGTCGACTTGTCATATTCACCGTCTGTAGCTACACGTTTTATTCCAGACGACGAAGTTAGTGCAGGATTAATCGTTTTCAACTGCCCAGAGTTAGTTGATAGGGAAAGATTCACTAGCATGAGTGTTTCATGGATGATACAAATTTTTCAGGCAAACCACCAATACGGATGTCTTGGTCCAGATGTTGAAAGTATTATCCCTGGAAGTGAAATACCGAGGTGGTTTAACTATCAGCATGTGAGCATGGACAACTCAATAGTCATAGATGCATCTCCCGTTATGCATGACAATAATTGGATCGTAGTTGTGTGTTGTGCAATCTTCCAGGTACGGGAAATGCATTCTCCAAGAAAAACATCAGATTTTCGTGTTACAATTCCGGTCGATGTCAGGAGAGATCTACTCATGGACGATTCAGATCACATGTGGATATTCTACTTAACTCATGAAGAGTTCATTGATCAATGTAATTCTACGGAAGCACCTAATATTGGTTGCTTGAAAATGAAAATGAAAATACAGGACATGGAAGATTTCCGTGAATACACGATGAAACACGGACAAATGGACGAGACAGTTTTCCTGACTAAGAAACACGGGCAAATGGAAGCGAAAATTTTTCCGGTTGAAGTAAAGAAATACGGGTACCGTTGGGTATCTGAACAAGATCTAAAACTATCAAATTCAACAATGATGCATGATGCAAATTTGATAACTGGGAGGCACAAGTTTTTGGCAATGGAAAAAAACAGGTAG 1662 0.3863 MRADPISKIKHLKLLNVEDMNSLGSLSYLSNELGYLIWNKYAFDCLPPSFQPGKLVELNLRGSNIDRLWHGTKPLHNLKRLDLSFSKNLVEMPDLRDALNLERLALEGCIKLRKINPSLGLLRKLAVLNLTNCINLVSLPKSIFGLTSLQYLSVSGCSKLYNNELIDEPRNEENLKKLCLVEAPIHSQSTSSLIKKWLVRWPLDLLYSRAQRDSISYLIPSSATLPYLRELDLSFCNLVQIPDAIEKLHCLEKLNLKGNNFVTLPSLKDLFRLYNLNIQHCKRLKYFPNLPSRTQLPSDVYSVDLSYSPSVATRFIPDDEVSAGLIVFNCPELVDRERFTSMSVSWMIQIFQANHQYGCLGPDVESIIPGSEIPRWFNYQHVSMDNSIVIDASPVMHDNNWIVVVCCAIFQVREMHSPRKTSDFRVTIPVDVRRDLLMDDSDHMWIFYLTHEEFIDQCNSTEAPNIGCLKMKMKIQDMEDFREYTMKHGQMDETVFLTKKHGQMEAKIFPVEVKKYGYRWVSEQDLKLSNSTMMHDANLITGRHKFLAMEKNR 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00755 553 Pfam C-JID domain 368 525 IPR045344 -
Spst11g00755 553 Gene3D Ribonuclease Inhibitor 3 200 IPR032675 -
Spst11g00755 553 ProSiteProfiles Leucine-rich repeat profile. 250 271 IPR001611 GO:0005515
Spst11g00755 553 SUPERFAMILY L domain-like 9 305 - -
Spst11g00755 553 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 162 IPR044974 GO:0006952
Spst11g00755 553 Pfam Leucine Rich Repeat 54 73 IPR011713 -
Spst11g00755 553 Gene3D Ribonuclease Inhibitor 203 323 IPR032675 -
Spst11g00755 553 SMART LRR_typ_2 122 146 IPR003591 -
Spst11g00755 553 SMART LRR_typ_2 248 273 IPR003591 -
Spst11g00755 553 SMART LRR_typ_2 225 247 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00755 Spst-Chr11 30990275 30992181 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00755 25 327 WRKY Transcription Factor Family AT4G12020 34.385 3.10e-28 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00755 - - vum:124845879 550.821