Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00752 ATGGCTTCTTCATCTCAGCTCATCAAGACTTATGATGTCTTTGTGAGCTTCCGTGGTGAAGACACGCGCAACAGCTTTACTGGTTTTCTCTTTCAAGCTCTCTGCAGAAAAGGCATCCATGCCTTCAAAGATGATGATAATCTCAAGAAAGGCGAATCCATAGCCCCTGAGTTGCTACAAGCCATTCAAGGGTCTCGCCTTTTCCTCACTCTCTTCTCACAAAACTATGCTTCCTCTACTTGGTGCTTGCGTGAACTAGCAGAGATCTGTAACTGCGTTGAAACGTCGCCAAGGCGTGTTATACCTATATTTTATGACGTTGATCCTTCAACAACTTTGCTTCCAATTGCAATGGCTTCTTCATCTCAGCTCATCAAGACTTATGATGTCTTTGTGAGCTTCCGTGGTGAAGACACACGCAATAACTTTATTGGTTTTCTCTTTCAAGCTCTTCGAACAAAAGGTATCGATGTCTTCAGAGATCATGAAGATCTGAAGAAAGGCGAATCCATAGCACCAGAGCTCTTACAAGCCATTCAAGGGTCTCGCATTTTCATTGCGGTCTTCTCAAAGAACTATGCTTTCTCTACTTGGTGCTTGCGTAAACTAGCAGAGATCTGTAACTGCGTTGAAACATCGCCAAGATCTGTTCTGCCTATATTTTACGATGTTGATCCTTCAGAGGTGCGAAAACAGAGTGGCTTTTATGAGAGAGCATTTGCAGAACACGAAGAAAGATTCAAAGAAGATAAAGAGAAGGTGGAGGAAGTGCAGAGATGGAGAAAAGCGCTCACACATGTGGCCAATCTCTCTGGTTGGGATATTCGAAACAAGCAACAATATGCCGAAATTGAACAAATTGTTCAAACCATACTAAACATATCGGGTCCCAACTTAAGTCTTCGGAACGATGATCTAGTTGGTATAGAGTCTCGGGTTGAAAAATTAGCAAATCTTCTATGTTTGGGATCAGTGAATGAGGTTCGAGTTGTTGGTGTTGCAGTTGGAATCAGTGGGATGGGTGGCATAGGAAAACCAACTCTTGCTCAGGCTTTATATGAAAGAATCTCTCATCATTATAATATTCATTGTTTTATTGATGATGTAAGCAAAATTTATCGAGATACAAGTTCATTAGGTTTACAGAAGCAGTTACTTTCACAGTCTCTAAAGGAGAAAAATCTAGAGATTTGCAATGCTTTGGAGGGAACATATTTGGTGCGGACTAGGCTACATAATGCAAAGGCACTTGTTGTTCCTGACAATGTTGATGATGTTGAACAACTGAGAATGTTTAGAGGAAATAGGAACACTTTGTTGCGTGAATGCTTAGGTGAAGTTCTGTCACATGCTCAAGGCCATCCTTTGGCAATTGAAGTAATTGGGTCATCTTTGTTTGGTCGAAATGTATCACAATGGAAAGGTGCATTGGGTAGGCTAAAAGAGAATAAAAGTAGAAATATTATGGATGTTTTGCGTATAAGTTATGACCAGCTGGATGAAATTGACAAAGAAATATTTTTGGATATTGCCTGCTTCTTGAACTCCCAAGATGAAAAATATGTGAAGGAAATTCTAAATTTTCGTGGATTTCATCCTGAATATGGCCTAGAAGTTCTCATTGACAAATCACTCATAAAAATTGAATATGGGAGGATAAGTATGCATGGCTTGTTAGTGGATTTAGGCAGAGGTATTGTTCGAGAAAAATCGCCAAAGGAGCCTATGAAGTGGAGTAGATTGTGGGACTACCAAGATCTTCAGAAAGCTATGTTAGACGACCAGGCAACTGCAAATCTGGAAGCCATTGTTGTTCGATTATATATTGATGAGACAACAACGATGATGAGGGCAGATGGTCTATAA 1866 0.4025 MASSSQLIKTYDVFVSFRGEDTRNSFTGFLFQALCRKGIHAFKDDDNLKKGESIAPELLQAIQGSRLFLTLFSQNYASSTWCLRELAEICNCVETSPRRVIPIFYDVDPSTTLLPIAMASSSQLIKTYDVFVSFRGEDTRNNFIGFLFQALRTKGIDVFRDHEDLKKGESIAPELLQAIQGSRIFIAVFSKNYAFSTWCLRKLAEICNCVETSPRSVLPIFYDVDPSEVRKQSGFYERAFAEHEERFKEDKEKVEEVQRWRKALTHVANLSGWDIRNKQQYAEIEQIVQTILNISGPNLSLRNDDLVGIESRVEKLANLLCLGSVNEVRVVGVAVGISGMGGIGKPTLAQALYERISHHYNIHCFIDDVSKIYRDTSSLGLQKQLLSQSLKEKNLEICNALEGTYLVRTRLHNAKALVVPDNVDDVEQLRMFRGNRNTLLRECLGEVLSHAQGHPLAIEVIGSSLFGRNVSQWKGALGRLKENKSRNIMDVLRISYDQLDEIDKEIFLDIACFLNSQDEKYVKEILNFRGFHPEYGLEVLIDKSLIKIEYGRISMHGLLVDLGRGIVREKSPKEPMKWSRLWDYQDLQKAMLDDQATANLEAIVVRLYIDETTTMMRADGL 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00752 621 Gene3D - 125 294 IPR035897 -
Spst11g00752 621 Gene3D - 8 114 IPR035897 -
Spst11g00752 621 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 111 IPR035897 -
Spst11g00752 621 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 128 432 IPR044974 GO:0006952
Spst11g00752 621 ProSiteProfiles TIR domain profile. 9 132 IPR000157 GO:0007165
Spst11g00752 621 PRINTS Disease resistance protein signature 334 349 - -
Spst11g00752 621 PRINTS Disease resistance protein signature 410 424 - -
Spst11g00752 621 Pfam TIR domain 11 112 IPR000157 GO:0007165
Spst11g00752 621 Pfam TIR domain 128 293 IPR000157 GO:0007165
Spst11g00752 621 SMART till_3 10 126 IPR000157 GO:0007165
Spst11g00752 621 SMART till_3 127 270 IPR000157 GO:0007165
Spst11g00752 621 Pfam NB-ARC domain 333 428 IPR002182 GO:0043531
Spst11g00752 621 Gene3D - 295 443 IPR027417 -
Spst11g00752 621 SUPERFAMILY "Winged helix" DNA-binding domain 487 588 IPR036390 -
Spst11g00752 621 ProSiteProfiles TIR domain profile. 126 295 IPR000157 GO:0007165
Spst11g00752 621 SUPERFAMILY Toll/Interleukin receptor TIR domain 122 273 IPR035897 -
Spst11g00752 621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 299 510 IPR027417 -
Spst11g00752 621 FunFam Disease resistance protein (TIR-NBS-LRR class) 125 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00752 Spst-Chr11 30978218 30981689 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00752 115 607 WRKY Transcription Factor Family AT4G12020 25.830 1.56e-36 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00752 - - gmx:100814717 608.216