Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00737 ATGGAAGTCCAAATTGTAAATACAGGTACCGTACTTCAAGTAGGCGATGGTATTGCTCGTATTTTTGGTCTTGATGAAGTAATGGCGGGTGAATTGGTGGAATTTGAAGAAGGTACTATAGGTATTGCTTTGAATTTGGAATCCAAAAATGTTGGTGTTGTATTAATGGGTGATGGTTTGATGATACAAGAGGGAAGTTCAGTAAAAGCAACAGGAAGAATTGCTCAGATACCAGTAAGTGAGGCTTATTTGGGTCGTGTTATAAATGCCCTGGCTAAACCAATTGACGGTCGAGGAGAAATTTCAGCTTCGGAATCTCGATTAATCGAATCTCCCGCTCCCGGTATTATTTCGAGACGTTCAGTATATGAGCCTCTCCAAACAGGACTTATTGCTATTGATTCGATGATCCCCATAGGACGGGGCCAGCGAGAATTAATTATTGGAGACAGACAAACAGGTAAAACAGCAGTAGCCACAGATACAATTCTCAATCAACAGGGACAAAATGTAATATGTGTTTATGTAGCTGTTGGTCAAAAAGCATCTTCTGTAGCTCAAGTGGTGACTACCTTACAAGAAAGAGGATCAATGGAATACACTATTGTAGTAGCTGAAACAGCGGATTCTCCAGCTACATTACAATACCTCGCGCCTTATACAGGAGCAGCTCTGGCTGAATATTTTATGTACCGTGAACGTCACACTTTAATCATTTATGACGATCTCTCTAAACAAGCACAGGCTTATCGTCAAATGTCTCTTCTATTACGAAGACCACCTGGTCGCGAAGCTTATCCAGGGGATGTTTTTTATTTACATTCGCGTCTTTTGGAAAGAGCCGCTAAATTAAGTTCTCAGTTAGGCGAAGGAAGTATGACTGCTTTACCAATAGTTGAAACTCAATCAGGAGATGTTTCAGCTTATATTCCTACTAATGTAATTTCCATTACAGATGGCCAAATATTCTTATCCGCCGATCTATTCAATGCTGGAATAAGACCTGCTATTAATGTCGGTATTTCAGTTTCTAGAGTTGGATCAGCGGCTCAAATTAAAGCCATGAAACAAGTAGCTGGTAAATTAAAATTGGAATTAGCACAATTCGCAGAATTAGAAGCTTTTGCACAATTCGCTTCTGATCTAGATAAAGCTACTCAAAATCAATTAGCAAGAGGTCAACGATTGCGCGAGTTGCTTAAACAATCCCAATCAGCTCCTCTTACTGTGGAAGAACAGATAGTAACTATTTATACCGGAACGAATGGTTATCTTGATTCATTAGAAATTGGACAGGTAAGGAAATTTCTTGTTGAGTTACGTGCTTACTTAAAGACGAATAAACCTCAATTCAAAGAAATCATATCTTCTACCAAGACATTCACTGGGGAAGCAGAAGCCCTTTTAAAGGACGCTATTAAGGAACAGAAGGAACTCTTTTTACTCCAGGAACAAGTAGAAAAAAATTGA 1470 0.3912 MEVQIVNTGTVLQVGDGIARIFGLDEVMAGELVEFEEGTIGIALNLESKNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAVGQKASSVAQVVTTLQERGSMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIVTIYTGTNGYLDSLEIGQVRKFLVELRAYLKTNKPQFKEIISSTKTFTGEAEALLKDAIKEQKELFLLQEQVEKN 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00737 489 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 3 480 IPR005294 GO:0015986|GO:0045261|GO:0046933
Spst11g00737 489 PIRSF F_ATPase_subunit_alpha 1 483 IPR005294 GO:0015986|GO:0045261|GO:0046933
Spst11g00737 489 FunFam ATP synthase subunit alpha 74 351 - -
Spst11g00737 489 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 129 344 IPR000194 GO:0005524
Spst11g00737 489 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 352 480 - -
Spst11g00737 489 Pfam ATP synthase alpha/beta family, beta-barrel domain 8 72 IPR004100 GO:0046034|GO:1902600
Spst11g00737 489 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 76 350 IPR027417 -
Spst11g00737 489 Gene3D - 352 480 IPR038376 -
Spst11g00737 489 NCBIfam F0F1 ATP synthase subunit alpha 3 479 IPR005294 GO:0015986|GO:0045261|GO:0046933
Spst11g00737 489 CDD ATP-synt_F1_alpha_N 7 73 - -
Spst11g00737 489 ProSitePatterns ATP synthase alpha and beta subunits signature. 335 344 IPR020003 GO:0005524
Spst11g00737 489 Gene3D - 74 351 IPR027417 -
Spst11g00737 489 FunFam ATP synthase subunit alpha 352 482 - -
Spst11g00737 489 Gene3D - 4 73 IPR023366 -
Spst11g00737 489 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 2 74 IPR036121 GO:0046034|GO:1902600
Spst11g00737 489 CDD F1-ATPase_alpha_CD 74 347 IPR033732 GO:0032559
Spst11g00737 489 Pfam ATP synthase alpha/beta chain, C terminal domain 351 475 IPR000793 GO:0015986
Spst11g00737 489 CDD ATP-synt_F1_alpha_C 355 480 IPR000793 GO:0015986
Spst11g00737 489 Hamap ATP synthase subunit alpha [atpA]. 1 481 IPR005294 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00737 Spst-Chr11 30496317 30497786 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00737 4 350 Primary Pumps ATPases(2) AT4G38510 29.781 4.90e-31 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00737 K02111 - gmx:121173224 889.797