Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00722 ATGATGGATGAGTTCCGTGGACCAATATCGCAAGTGGTCCCCCTTATAAGCACCAAAATTCAGCTTTCTATCTCATACTCAATGAAGTTTGTTCTTCTTACTCTGATTAGTGTTATACTTCGTATACTGGTCATCCCTTCTCTTGTTTTCGCAGTTGAAGACACATCATCCATTTCGCAGTCCCAGCCCCTAAGTCATGAAAAGACCATTGTTTCTTCCCCACTTGGAACCTTTGTGCTTGGTTTCTTCAATCTCGGAAATCCCAACAAAATCTACCTTGGGATTTGGTACAAGAATATTCCGTTTCGAAACGTTGTTTGGGTCGCAAACGGTGCCAATCCTATCAATGATTCCTCTTGCATCTTGAAACTAAGCAGTTCTGGGAACTTGGTCCTTACACACAACGACATGGTTGTTTGGTGCACAAGTTCTCCAGAAGAATCACAGAATCCAGTGGCAGTGCTTTTGGATTCCGGCAATCTTGTAATAAGAGACCAGAATGCCGTAAATCAAGAGGAATATATGTGGCAAAGCTTTGATTACCCTTCTAATACAATGGTGGCAGGAATGAAGATTGGATGGGACCAAAATAGAAATCTTAATAAGCGCCTCATAGCTTGGAAGAATGATGATGATCCCACACCAGGAGACTTAACTTGGGGCGTAACACTGAACCCTTATCCTGAGATGTATATCATGAAGGGAACCAAAAAGTACCACAGAGTTGGACCATGGAATGGTTTGCGTTTCAGTGGCAGGCCGCAAATGAAGGATAATCGCATTTACAATTACGAGTTTGTCTCCAACAAGAAAGAGGTTTATTTCACATGGACCCTCAAGAATACTAGTGTAGTAACAATAGCTGTAGTTAACCAAACCACACTAGAGCGTCCTCGTTATGTATGGTCAGACACTGACAAAGCATGGAATCATTATTCAACCATGCCAGAAGATTACTGTGATCATTATGGCGTATGTGGATCTAACGCATATTGCAGCACTTATGCATCACCAATGTGTGCATGTTTAAAAGGGTTCGAGCCTAAGTCCCCTGAAAACTGGACCTCAACTGATTGGTCTCAAGGATGTGTCCTTAAACATCCTTTGAATTGCAAGAATGATGGGTTTGTCCTAGTGGAAGGCTTGAAAGTGCCGGACACTAAAGATACGTCCGTAGATGAGAGTATTAATCTAGAGCAATGCAAAACCAAATGCTTGAATTATTGCTCCTGCATGGCATATACAAATTCTGATATAAGGGGAGCTGGAAGTGGTTGTGTGATGTGGTTTGGTGATTTGTTTGACATCAAACAGTATCCAGCTCCTGAAAATGGGCAGGGTCTATATATCCGGTTGCCTGCTTCAGAATTAGGGAAGTCAAAGCCAGAAAATAGATGTGAAACATATGTGGATGATTTGGATCTCCCATTAATTGATTTGTCAATAATTACGGCTGCCACTGATAATTTCTCAGACGTGAATAAGATTGGAGAAGGTGGTTTTGGACCAGTATATTGGGGAAAATTAGCTAGTGGGCTAGAAATTGCTGTAAAGAGACTTTCGCAGAACTCAGGACAAGGAATAACCGAATTTTTAAATGAAGTTAAACTCATTGCAAAACTTCAGCACCGGAATCTTGTAAAGCTTCTGGGCTGTTGCATTCAGAAGCAAGAAAAAATATTGGTTTATGAATACATGTCTAATGGCAGCCTAGATTACTTCATTTTTGATTTTGGATTGGCTAAAACTGTTGGAAGAGAGGAGGTTGAAGGAAACACAAATAAAATAGTTGGAACATTTGGGTACATGGCACCAGAGTATGCTGTTGATGGACAATTTTCTGTAAAATCTGATGTATTCAGCTTTGGTGTTTTACTGCTGGAGATAATATATGGGAAGAAAAACAGAGGACGATATCATGGAAAGCAATACAACCTTGTTGATCATGGTCGTCATAGTACCAATCGCGGCAAGAAAATCAACCGAGGCAAAGGCAACAACACCAGCGGTGACAGAGGCAAACGTGGCAATGGTGCAGGTACCCGTTGCAGCCAAATTCCCTTTTCCTTCTCCTTCGGCACACCCCATCACCCCCACCCCCACCCCCACCCCCACCATCACCTCGACTCCCCTCACGACACACTCTCTGGCTACTCACCTGCACCTGACCCCAAATCTGTTCCCCTAGCTTACTTCACTCAACCACGACTCATTCTTCCAGTTCACCCTCTCGCTCGCCCTTCACTCACCCTCTCCCCAGCCACCGCGTGGCACCCTCCCAGTCACCGAACCACTCCCTCACCTCTGGGCCCCATCCCAACCACATCACTTCCTCGCCTCCACCGCCAGCGGCCCCAAAATCCCTCACCCGCAGTCTCCCTTTCGGTTCTGGTCTTGCTAGCGGTGGCGCCTCTCGATCGCGGTCCTTTATAG 2433 0.4443 MMDEFRGPISQVVPLISTKIQLSISYSMKFVLLTLISVILRILVIPSLVFAVEDTSSISQSQPLSHEKTIVSSPLGTFVLGFFNLGNPNKIYLGIWYKNIPFRNVVWVANGANPINDSSCILKLSSSGNLVLTHNDMVVWCTSSPEESQNPVAVLLDSGNLVIRDQNAVNQEEYMWQSFDYPSNTMVAGMKIGWDQNRNLNKRLIAWKNDDDPTPGDLTWGVTLNPYPEMYIMKGTKKYHRVGPWNGLRFSGRPQMKDNRIYNYEFVSNKKEVYFTWTLKNTSVVTIAVVNQTTLERPRYVWSDTDKAWNHYSTMPEDYCDHYGVCGSNAYCSTYASPMCACLKGFEPKSPENWTSTDWSQGCVLKHPLNCKNDGFVLVEGLKVPDTKDTSVDESINLEQCKTKCLNYCSCMAYTNSDIRGAGSGCVMWFGDLFDIKQYPAPENGQGLYIRLPASELGKSKPENRCETYVDDLDLPLIDLSIITAATDNFSDVNKIGEGGFGPVYWGKLASGLEIAVKRLSQNSGQGITEFLNEVKLIAKLQHRNLVKLLGCCIQKQEKILVYEYMSNGSLDYFIFDFGLAKTVGREEVEGNTNKIVGTFGYMAPEYAVDGQFSVKSDVFSFGVLLLEIIYGKKNRGRYHGKQYNLVDHGRHSTNRGKKINRGKGNNTSGDRGKRGNGAGTRCSQIPFSFSFGTPHHPHPHPHPHHHLDSPHDTLSGYSPAPDPKSVPLAYFTQPRLILPVHPLARPSLTLSPATAWHPPSHRTTPSPLGPIPTTSLPRLHRQRPQNPSPAVSLSVLVLLAVAPLDRGPL 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00722 810 SMART blect_4 61 182 IPR001480 -
Spst11g00722 810 MobiDBLite consensus disorder prediction 753 789 - -
Spst11g00722 810 Gene3D Transferase(Phosphotransferase) domain 1 572 664 - -
Spst11g00722 810 Pfam S-locus glycoprotein domain 241 350 IPR000858 GO:0048544
Spst11g00722 810 MobiDBLite consensus disorder prediction 648 722 - -
Spst11g00722 810 CDD B_lectin 61 182 IPR001480 -
Spst11g00722 810 SUPERFAMILY Protein kinase-like (PK-like) 476 635 IPR011009 -
Spst11g00722 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 105 213 IPR036426 -
Spst11g00722 810 CDD PAN_AP_plant 367 453 - -
Spst11g00722 810 Gene3D - 49 179 IPR036426 -
Spst11g00722 810 MobiDBLite consensus disorder prediction 660 674 - -
Spst11g00722 810 FunFam receptor-like serine/threonine-protein kinase SD1-8 462 565 - -
Spst11g00722 810 SMART ntp_6 371 452 IPR003609 -
Spst11g00722 810 Gene3D Phosphorylase Kinase; domain 1 456 565 - -
Spst11g00722 810 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 43 659 - -
Spst11g00722 810 ProSiteProfiles PAN/Apple domain profile. 371 453 IPR003609 -
Spst11g00722 810 ProSiteProfiles Protein kinase domain profile. 490 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00722 810 Pfam PAN-like domain 371 436 IPR003609 -
Spst11g00722 810 Pfam D-mannose binding lectin 105 208 IPR001480 -
Spst11g00722 810 Pfam Protein tyrosine and serine/threonine kinase 494 575 IPR001245 GO:0004672|GO:0006468
Spst11g00722 810 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 51 179 - -
Spst11g00722 810 ProSiteProfiles Bulb-type lectin domain profile. 55 176 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00722 Spst-Chr11 30386974 30393106 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00722 478 640 Receptor kinase-like Gene Family AT4G23130 46.575 6.28e-51 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst11g00722 S_locus_glycop 1.9e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00722 - - gmx:100808807 865.144