Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00721 ATGGTTGTTGCATTGAAGGACAAGAAAAAAATGCTAGTTTATGAGTACATGGCTAATGGCAGCCTAGACTCCTTCATATTTGGTATGAATAACCAACAAAGCAAAGATTTGGTTGCTATAAGCAGATTACTAATTGATGATTCGATTGGGTACACGGCACCAGAGTATGCTGTTGATGGGTTATTTTCTGTGAAATCTGATGTGTTTAGCTTTGGTATTTTAGTCTTGGAGATGGTATGTGGCAAGAAAAATAGAAGACTTTATCAAACAGATAAGAATCTCAATCTCGTTGGTCATGCAAGGCTTCAATCTGTTTTGAATTTGCCCGCAATGGCTTCGGTTATTCTAATGTTGGAGAGTCGCATGGAATTGGTTAAGCCTAAAGAACCTGGTTTTATTACGAAAAATGTTTCAGTTGAAGAAGAATTATACTCAAATGAGAAATACACATCTCCAAGCAACGATGTAACGGTTTCCATGTTGGAAGCTCGATGA 495 0.3737 MVVALKDKKKMLVYEYMANGSLDSFIFGMNNQQSKDLVAISRLLIDDSIGYTAPEYAVDGLFSVKSDVFSFGILVLEMVCGKKNRRLYQTDKNLNLVGHARLQSVLNLPAMASVILMLESRMELVKPKEPGFITKNVSVEEELYSNEKYTSPSNDVTVSMLEAR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00721 164 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 48 101 - -
Spst11g00721 164 SUPERFAMILY Protein kinase-like (PK-like) 7 86 IPR011009 -
Spst11g00721 164 Gene3D Transferase(Phosphotransferase) domain 1 16 147 - -
Spst11g00721 164 Pfam Domain of unknown function (DUF3403) 122 164 IPR021820 GO:0004674
Spst11g00721 164 Pfam Protein tyrosine and serine/threonine kinase 27 94 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00721 Spst-Chr11 30358400 30364002 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00721 26 153 Receptor kinase-like Gene Family AT4G23140 32.727 3.78e-19 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst11g00721 PK_Tyr_Ser-Thr 4.8e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00721 - - gmx:100802962 154.836