Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00720 ATGCATATTCTTACTTTCATGATTATGGTTGCATGCATATTTGTTCCCTTTCTCAAAATTTCCACAGGAAATAGTTCTATCAATGTGTCCCAATCCCTGAGGGATAAGCAGATATTGATTTCAACTGGTGGAAAGTTTGAACTTGGGTTCTTCAGCCCAGGAAAATCCCAGAAACGTTACCTGGGCCTTTGGTACAAGAATATCCCAGATCAGAAAATTCTTTGGGTTGCCAATAGGGCCAACCCCATCAATGATTCCTCAGCCATCTTAACACTGAATCCCACAGGAAATCTTGTTCTTACCCAAAATAGATCTGTTGTTTGGCAAACCAACTCTCAAAAACAAGCACAAAATCCAGTAGCAGTGCTCTTGGACAGTGGCAATCTTGTGATAAGAAACGAAGGAGAAACAAACCCAAATGAGTATTTGTGGCAAAGCTTTGACTATCCAACTGATACACTCTTTCCCGGGATGAAGTATGGACGGGACCTCCGAACTGGTCTGGAATGGAGATATACTGCGTGGAAGAGTCCAGATGATCCATCCCCAGGAGACGTTTCTAGGGTTTTAAAACTCTATAGCTATCCCGAGTTTTATACAATGAAGGGAACACAAAAGTGGTTCAGGTTTGGACCTTGGAATGGCCTATATTTTAGTGGATCACCAGATCTACAGAACAACACCATATTTGGGTTCAATTTTGTCAGCAATGAGGATGAGATTTACTATACTTATACCCTTGCAAATGATTCTGTCCTCTCCATAAATGTAATAAACGAAACAGGTACAGTTTCTGGCTATGTATGGGAGAAGGGTGGTCAAAATTGGAGGACATGTAGATACCTCCCGAATGAGTTTTGTGACAATTATGGTCTTTGCGGACCCTACGGGAACTGCATAAGTACCCAAACACAAGTCTGCCAATGTTTAAAAGGTTTCAAACCAAAGTCGCCAAAGAAATGGAACTCTTCGGATTGGAGTGGAGGATGTGTCCGCAATAAACCGTTAAGTTGCAACGGTACAGACAGAGACGGGTTTGTGAAATTTGAAGGGCTGAAAGTTCCTGATACTACACATACTTTGTTGGATGAGAGTATTGATCTAGAGCAATGCAGAGAGAAGTGCTTAAATAATTGTACTTGTATGGCCTATGCTAATTCGGACATAAGAGGTTCAGGTAGTGGTTGTGTCATGTGGTTTGGAGATCTCATTGATTTGAGACAGTTTCAACCTGGTAAACAAGATCTATACATCAGGATGGCTGCTTCAGAGTTAGAACCTGTTTATAGCCACAAGAAGATGAAGACCATCGTGAAGTCCTTCCTCCGTTTTGTAGGGCAATCATTGGCAGAAGAACACCATGAAAAGCAAGTGGATGATCTGGACGGAATATTAACAGATATGCAAGAAATTGCTGTAAAGACTCTATCAAGGAGCTCATGGCAAGGAGTAACAGAGTTCATAAATGAAGTAAAATTGATTGCTAAACTTCAGCATCGAAATCTAGTAAAACTTCTTGGTTGTTGCATTCAAGGACAAGAAAAAATGCTAGTTTATGAGTACATGGCAAATGGCAGCTTAGATTCCTTCATATTTGTGGCTATATGGCACCGGAAGTTCCACAAGAGCTGTGATACAATGGGTGTTCATACTTTCGTGGTTTTATATGCATGCATACTTGTTCTCTCTCTAGAAATTTCCGCAGCAAATGATTCAATCAACGTGCTCCAGTCTGTGAGTGATGATGGGAAGACCTTGGTATCAAAAGGTGGAATCTTTGAACTTGGGTTCTTCAGCCCTGGTAGCTCCCATAAACGTTACTTGGGAATTTGGTACAAGAATGTCCCAGATAAGACAGTTGTTTGGGTTGCTAATGGGGCCCACCCCATCAATGATTCCTCTGGCATCTTAACACTCAACACCACAGGCAATCTTGTTCTCACCCACAGTGGTTCTTTTGTTTGGCACACCAACTCTCAGAAACAAGAACAGAATCCGGTGGTACAACTCTTGGACAGCGGCAATCTTGTGATCAGAAACGACGGAGAAAATAACCCGGAAATGTATTTGTGGCAAAGCTTTGACTATCCATCTGATACACTCATGCCAGGGATGAAGCTTGGATGGGACCTCCGAACTGGTTTGGAATGGAAATACACTGCATGGAAGAGTCCAGATGATCCATCCCCAGGAGATGTTTCTCGGGTTATGAAACTCTATAACTATCCTGAGATTTATATGATGAAGGGTACAAAAAAGTTGCTCAGGTATGGACCTTGGAATGGTGAATATTTTAGTGGGATGCCTGATCTACTGAATAACAGCATTTTTGGCTTGAGTTTTGTCAATAATGAGGATGAGGTTTACTGCACCTTTACCCTCGTGAATGATTCTGTCTTCTCCAGAACTGTAACAAACCAATCAGGTACCATTGTTCGTTATGTATGGCAGGAGGGTGATGAAATATGGAGAATATATAGATCCTACCCGAAAGAGTATTGCGACAATTATGACCTCTGTGGACCCAACGGATCCTGTGAACGAACTCAATCACAACCCTGCCAATGTTTGAAAGGTTTCAGTCCAAAGTCACCACAAAATTGGAACTCATCGGATTGGACTGAAGGATGTGTGCGCAATAAACCGTTGAGTTGCAAAGGTGATGTGTTTATCCTATTTGAAGGGTTAAAAGTTCCAGCTACCACATATACTTGGTTGAATGAGAGTATTGGCCTCAAGGAATGCAAAGTGAAGTGTTTGAATAATTGTACTTGTATGGCCTATACTAATTCAGATATAAGAAATGGGGGTAGTGGTTGTGTCTTGTGGTTTGGAGATCTCATTGACATGAAAAAGATTGAAACTGGTGGGCAAGACCTGTATATCAGGATGAATGCTTCTGAGGCAGGAAATTCATCGACAGAAGAGAACAATGAGAAACATGTAGATGATCTGGACGGAATATTAATCGACAAGAAAGAAATTGCTGTAAAGACTCTATCAAGCAGCACGTGGCAAGGAATGACAGAGTTCATCAATGAAGTAAACTTGACTGCAAAACTTAAACATCGGAATCTTGTAAACCTTCTTGGTTGTTGCATTCAAAGAGAAAAAAGAATGCTCGTTTACGAGTACATGGCAAATGGCAGCCTAGACTTCTTCATTTTTGATGATAAAAAAAGTCAACTGCTGGAGTGGCCTCAACGGTTCCACATAATTTTCGGAATTGCAAGGGGCCTTATGTACCTTCATCAAGATGCCCCACTGAGGATTATCCACAGAGATCTCAAAGCAAGTAACATCCTACTCGATCAAAAATTGAATCCGAAAATATCGGATTTTGGTGTGGCGAGATCTTTTGGAGTAGACCAATTTGAAGGAAGCACAAATAGAGTAGTAGGGACCTGTGGGTATATGGCACCGGAGTATGCAGCTGATGGATTATTTTCTGAAAAATCTGATGCCTTTAGCTTTGGCATTCTGGCGTTGGAGATTGTGTGTGGGAAGAGAAATAAAGGACTTTATCACATAGACACGAGTCTTAACCTCGTTGCTCATTTATGGTCATTATGGAAAGCGGGCAAGCCAATAGATTTCGTTGACCCAAACATGAAGAAATCATCATGCGTTGTATCTGAAGTACTCCGTTGTCTCCATGTCAGTCTTTTGTGTGTGCAACAGATCCCAGAAGATAGGCCTACAATGTCGTCCGTGATTCTAATGTTGGAGGGTCACAAGGAATTGGTTGAGCCTAAAGAACCTGGTTTCATTTCCAGCAAAGTTTTACTTGTAGAAGAATTACTCTCACCTCAGAAAGACACAAATTCAACCAACGAAGTGACCATTACCATGTTAGACCCTCGATGA 3867 0.4143 MHILTFMIMVACIFVPFLKISTGNSSINVSQSLRDKQILISTGGKFELGFFSPGKSQKRYLGLWYKNIPDQKILWVANRANPINDSSAILTLNPTGNLVLTQNRSVVWQTNSQKQAQNPVAVLLDSGNLVIRNEGETNPNEYLWQSFDYPTDTLFPGMKYGRDLRTGLEWRYTAWKSPDDPSPGDVSRVLKLYSYPEFYTMKGTQKWFRFGPWNGLYFSGSPDLQNNTIFGFNFVSNEDEIYYTYTLANDSVLSINVINETGTVSGYVWEKGGQNWRTCRYLPNEFCDNYGLCGPYGNCISTQTQVCQCLKGFKPKSPKKWNSSDWSGGCVRNKPLSCNGTDRDGFVKFEGLKVPDTTHTLLDESIDLEQCREKCLNNCTCMAYANSDIRGSGSGCVMWFGDLIDLRQFQPGKQDLYIRMAASELEPVYSHKKMKTIVKSFLRFVGQSLAEEHHEKQVDDLDGILTDMQEIAVKTLSRSSWQGVTEFINEVKLIAKLQHRNLVKLLGCCIQGQEKMLVYEYMANGSLDSFIFVAIWHRKFHKSCDTMGVHTFVVLYACILVLSLEISAANDSINVLQSVSDDGKTLVSKGGIFELGFFSPGSSHKRYLGIWYKNVPDKTVVWVANGAHPINDSSGILTLNTTGNLVLTHSGSFVWHTNSQKQEQNPVVQLLDSGNLVIRNDGENNPEMYLWQSFDYPSDTLMPGMKLGWDLRTGLEWKYTAWKSPDDPSPGDVSRVMKLYNYPEIYMMKGTKKLLRYGPWNGEYFSGMPDLLNNSIFGLSFVNNEDEVYCTFTLVNDSVFSRTVTNQSGTIVRYVWQEGDEIWRIYRSYPKEYCDNYDLCGPNGSCERTQSQPCQCLKGFSPKSPQNWNSSDWTEGCVRNKPLSCKGDVFILFEGLKVPATTYTWLNESIGLKECKVKCLNNCTCMAYTNSDIRNGGSGCVLWFGDLIDMKKIETGGQDLYIRMNASEAGNSSTEENNEKHVDDLDGILIDKKEIAVKTLSSSTWQGMTEFINEVNLTAKLKHRNLVNLLGCCIQREKRMLVYEYMANGSLDFFIFDDKKSQLLEWPQRFHIIFGIARGLMYLHQDAPLRIIHRDLKASNILLDQKLNPKISDFGVARSFGVDQFEGSTNRVVGTCGYMAPEYAADGLFSEKSDAFSFGILALEIVCGKRNKGLYHIDTSLNLVAHLWSLWKAGKPIDFVDPNMKKSSCVVSEVLRCLHVSLLCVQQIPEDRPTMSSVILMLEGHKELVEPKEPGFISSKVLLVEELLSPQKDTNSTNEVTITMLDPR 1288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00720 1288 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1091 1103 IPR008271 GO:0004672|GO:0006468
Spst11g00720 1288 SMART ntp_6 341 420 IPR003609 -
Spst11g00720 1288 SMART ntp_6 885 964 IPR003609 -
Spst11g00720 1288 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 181 IPR036426 -
Spst11g00720 1288 ProSiteProfiles Bulb-type lectin domain profile. 571 691 IPR001480 -
Spst11g00720 1288 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 147 - -
Spst11g00720 1288 ProSiteProfiles Bulb-type lectin domain profile. 24 144 IPR001480 -
Spst11g00720 1288 ProSiteProfiles PAN/Apple domain profile. 885 966 IPR003609 -
Spst11g00720 1288 CDD B_lectin 582 697 IPR001480 -
Spst11g00720 1288 Gene3D Transferase(Phosphotransferase) domain 1 1046 1254 - -
Spst11g00720 1288 Pfam S-locus glycoprotein domain 756 864 IPR000858 GO:0048544
Spst11g00720 1288 Pfam S-locus glycoprotein domain 208 317 IPR000858 GO:0048544
Spst11g00720 1288 FunFam Uncharacterized protein 456 521 - -
Spst11g00720 1288 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 555 1233 - -
Spst11g00720 1288 SUPERFAMILY Protein kinase-like (PK-like) 467 535 IPR011009 -
Spst11g00720 1288 Gene3D - 19 147 IPR036426 -
Spst11g00720 1288 Gene3D - 565 694 IPR036426 -
Spst11g00720 1288 Pfam D-mannose binding lectin 619 723 IPR001480 -
Spst11g00720 1288 Pfam D-mannose binding lectin 73 176 IPR001480 -
Spst11g00720 1288 SMART blect_4 30 150 IPR001480 -
Spst11g00720 1288 SMART blect_4 577 697 IPR001480 -
Spst11g00720 1288 Pfam Protein tyrosine and serine/threonine kinase 468 531 IPR001245 GO:0004672|GO:0006468
Spst11g00720 1288 Pfam Protein tyrosine and serine/threonine kinase 992 1239 IPR001245 GO:0004672|GO:0006468
Spst11g00720 1288 SUPERFAMILY Protein kinase-like (PK-like) 988 1243 IPR011009 -
Spst11g00720 1288 Pfam PAN-like domain 338 406 IPR003609 -
Spst11g00720 1288 Pfam PAN-like domain 885 950 IPR003609 -
Spst11g00720 1288 Gene3D Phosphorylase Kinase; domain 1 422 521 - -
Spst11g00720 1288 Gene3D Phosphorylase Kinase; domain 1 965 1045 - -
Spst11g00720 1288 CDD PAN_AP_plant 335 421 - -
Spst11g00720 1288 CDD B_lectin 30 150 IPR001480 -
Spst11g00720 1288 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 566 694 - -
Spst11g00720 1288 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1046 1250 - -
Spst11g00720 1288 SMART serkin_6 961 1249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00720 1288 SUPERFAMILY alpha-D-mannose-specific plant lectins 620 728 IPR036426 -
Spst11g00720 1288 ProSiteProfiles Protein kinase domain profile. 947 1248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00720 1288 CDD PAN_AP_plant 882 963 - -
Spst11g00720 1288 ProSiteProfiles PAN/Apple domain profile. 338 422 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00720 Spst-Chr11 30332714 30342947 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00720 459 541 Receptor kinase-like Gene Family AT4G23150 44.944 1.72e-16 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst11g00720 PK_Tyr_Ser-Thr 2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00720 - - vra:106754325 1182.16