Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00719 ATGGACATTCTTTCCTTCATGATTATGGTTACGTGCATACTTGTTTCCCTACTCAAAATTTCTCTAGGAAATGATTCTCTTAAGGCGCCACAGTCATTGAGTGACGGACAGACCTTGGTGTCAAAAGGTGGAATGTTTGAACTTGGGTTTTTCAGCCCAGGTAGTTCCCAGAAACGTTACCTTGGCATTTGGTACAAGAATATCCCAACTCACACATTTGTTTGGGTAGCTAATGGGATGAACCCCATCAATGATTCCTCGGGTATCTTAACACTCAACAACACAGCCAATCTTGTTCTCACCCAAAATGGGTCTCTTGTTTGGCACACCAACGTTCAAAAACAAGCACAAAATCCAGTGGCAGTGCTCTTGGATAGTGGCAATCTTGTGATAAGAAATGAGGGGCAAACAAACCCAGAAGATTATTTGTGGCAAAGCTTTGACTATCCATCTAATACACTCTTGTCAGGGATGAAATTAGGATGGGACCTCCGAAATGGTCTGGAACGGAAAGTGACATCTTGGAAGAGTCCAGATGATCCATCCCCAGGTGATGTTCATTGGGTTTTGAAACCCTATAATTATCCTGAGTTGTATCTGATGCAGGGAACAAAAAGGATATTGAGATACGGACCTTGGAATGGCGTATACTATAGTGGATTACCAGATCTAAGGAATAACACCATTTTTGGCATCATTTCTGTGAGAAATAAGGAAGAGATTTACGAATCCTTTAGCCTCATAGATAATTCTATCCTCTGCATAGGTGTAATAAACCAAACAGGTAGAATTTATACCTATGTATGGGCGGAGGGTGATCAAGTATGGAGGACATATGTTTCACAACCAAAAGACTTTTGCGACTCTTATGATCTCTGCGGCGCCTATGGGATATGCATGAATTCAGAAACACAAGTATGCCAATGTTTGAAAGGTTTTAGTCGAAAGTCACCACAAGCAACTGAGTGGAGTCAAGGATGTGTCCGCAATGAACCGTTAAGTTGCAACGGTACAGACAAAGATGGGTTTGTGAAATTTGAAAGGTTAAAAGTTCCAGATTCGACTCATACATGGGTGGATGAGAGTATTGGTCTAGAGGAATGCAGAGTGGAGTGTTTGAGTAATTGTTCTTGTATGGCCTATACAAATTCAGACATAAGAGGTACAGGTAGTGGTTGTGTCATGTGGTTTGGAGATCTCATTGACTTGAAACAGTTTGACACTGGAGGGCAAGATCTATATATCAGGATGTCTGCTTCGGAGTTAAAACACAAGAAGAACACACTCACGATAGTTGCTTCCACCGTTGCAGCAATTATTGGTGTTTTGTTATTATTAAGTTCTTATTTTATCTGCAGAACCCGGTGGAACAATGCCGTTCTCCTCATTGCAGAGAAAGACAAGGGCGTGAAGGATGATATTAATTTACCAACATTTGATTTTTCATCCATCTCCAATTCCACAAATCACTTTTCAGAAAGTAACAAATTGGGACAAGGTGGCTTTGGGCCAGTATATAAGGGCATATTAGGTGGACAAGAGATCGCAGTGAAGAGACTTTCTGAAACTTCTAGACAAGGTTTGGACCAGTTCAAAAACGAAGTCAGGTTCATTGCAAAACTTCAACACCGCAATCTAGTAAAGCTTCTTGGTTGTTCTATTAAGCAAGATGAGAAGCTCTTGATTTATGAATTCATGCCCAATAGAAGCTTAGACTACTTTATTTTTGAGGATAGGCCAAACATGTCATCAGTAATTCTAATGTTGAATGGTGAAAAGTTATTGCCCGAACCGAGTCAACCCGGATTCTACACAGGAAATGATCATCCGACCGAGGTAGAATATTCTCCAAGATATTCCACGAATGAGATGTCTAACTCTTTGTTGGAGGCAAGATAA 1899 0.4065 MDILSFMIMVTCILVSLLKISLGNDSLKAPQSLSDGQTLVSKGGMFELGFFSPGSSQKRYLGIWYKNIPTHTFVWVANGMNPINDSSGILTLNNTANLVLTQNGSLVWHTNVQKQAQNPVAVLLDSGNLVIRNEGQTNPEDYLWQSFDYPSNTLLSGMKLGWDLRNGLERKVTSWKSPDDPSPGDVHWVLKPYNYPELYLMQGTKRILRYGPWNGVYYSGLPDLRNNTIFGIISVRNKEEIYESFSLIDNSILCIGVINQTGRIYTYVWAEGDQVWRTYVSQPKDFCDSYDLCGAYGICMNSETQVCQCLKGFSRKSPQATEWSQGCVRNEPLSCNGTDKDGFVKFERLKVPDSTHTWVDESIGLEECRVECLSNCSCMAYTNSDIRGTGSGCVMWFGDLIDLKQFDTGGQDLYIRMSASELKHKKNTLTIVASTVAAIIGVLLLLSSYFICRTRWNNAVLLIAEKDKGVKDDINLPTFDFSSISNSTNHFSESNKLGQGGFGPVYKGILGGQEIAVKRLSETSRQGLDQFKNEVRFIAKLQHRNLVKLLGCSIKQDEKLLIYEFMPNRSLDYFIFEDRPNMSSVILMLNGEKLLPEPSQPGFYTGNDHPTEVEYSPRYSTNEMSNSLLEAR 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00719 632 SMART tyrkin_6 491 628 IPR020635 GO:0004713|GO:0006468
Spst11g00719 632 ProSiteProfiles EGF-like domain profile. 283 319 IPR000742 -
Spst11g00719 632 MobiDBLite consensus disorder prediction 614 632 - -
Spst11g00719 632 CDD PAN_AP_plant 332 416 - -
Spst11g00719 632 SMART ntp_6 338 417 IPR003609 -
Spst11g00719 632 Pfam D-mannose binding lectin 72 176 IPR001480 -
Spst11g00719 632 Pfam Protein tyrosine and serine/threonine kinase 494 582 IPR001245 GO:0004672|GO:0006468
Spst11g00719 632 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 181 IPR036426 -
Spst11g00719 632 Gene3D Phosphorylase Kinase; domain 1 461 565 - -
Spst11g00719 632 SMART blect_4 30 150 IPR001480 -
Spst11g00719 632 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 147 - -
Spst11g00719 632 MobiDBLite consensus disorder prediction 598 632 - -
Spst11g00719 632 Pfam PAN-like domain 335 403 IPR003609 -
Spst11g00719 632 SUPERFAMILY Protein kinase-like (PK-like) 475 584 IPR011009 -
Spst11g00719 632 Gene3D - 20 147 IPR036426 -
Spst11g00719 632 ProSiteProfiles Protein kinase domain profile. 491 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00719 632 ProSiteProfiles PAN/Apple domain profile. 335 418 IPR003609 -
Spst11g00719 632 Pfam S-locus glycoprotein domain 209 316 IPR000858 GO:0048544
Spst11g00719 632 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 456 565 - -
Spst11g00719 632 CDD B_lectin 31 150 IPR001480 -
Spst11g00719 632 ProSiteProfiles Bulb-type lectin domain profile. 24 144 IPR001480 -
Spst11g00719 632 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 334 417 - -
Spst11g00719 632 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 7 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00719 Spst-Chr11 30328422 30331356 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00719 423 578 Receptor kinase-like Gene Family AT4G05200 46.250 2.43e-36 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst11g00719 S_locus_glycop 5.4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00719 - - gmx:100801916 912.909