Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00706 ATGGCAATTTTCATTCTTACACTTATCATTTGCAACCTACTTTTTCTCCTCTCAAAAGCTTCTTCAACTGATACACTTACCCTCTCACAATCTCTCCCTGATGGCACCACCTTAGTGTCCAAAGATGAAACCTTCGAACTGGGTTTCTTCTCCCTAAGAAATTCCACAAACCGTTACGTAGGAATCTGGTTCAAAAACATCCCAGTAAAAACCATTGTTTGGGTTGCAAACCGTGACCACCCTCTCAAAGACAACTCCACCAAGTTGACCATAACCTGCGACGGAAACCTCGTCCTTCTCACCAAGAACAACACAGTTCACTGGTCAACAAACACGACAACAAAGCCCTTGAGACCCACTTTGCAACTCTTAAACACCGGAAACTTAATACTCCGCAACGACAACGATGATAACAATAGCATCAATAATGAAGAGAAGTTCTTGTGGCAAAGCTTTGACTACCCTTGTGACACATTGTTACCAGGAATGAAGCTTGGATGGAACAAAAAAACGGGTCTCAATCGACGTGTTACTGCGTGGAAGAATTGGGATGACCCTTCTGCTGGGAACTTCACATGGGGCATCACATTTGACAGCAACCCTGAAATGGTTCTCTGGAATGGAACATCTAAGTACCATAGGAGTGGCCCTTGGAACGGTGTCCGGTTCAGTGGTGCATTTGGTGGGTCAAATAGCTTAACCACTCACCCTCTTTTCGTTTACAAATTGGTCAACAACAACAATGATGAAGCGTACTACTCATACAGCTCCATCAACAAGTCCCTGATCTCAATAGTTGTCATGAACCAAACCCTCTTCCGCCGACAACGCATCATTTGGATCCCCGAAAACGGAACATGGAGGTTGTTCCAAACCGCACCAAGAGATATTTGTGACACCTACAATCCGTGTGGTTCTTATGCAAATTGCATGGTTGATGCATCACCTGTGTGCCAATGTTTAGAGGGGTTTGAACCGAAGTCTTCGGAGACTATGGACTTGGCACAAGGGTGTGTGAGAAGAGAACCGTGGAGGTGCAAGGTGGAAGGGAGAGATGGGTTTAGAAAATTTATAGGGTTGAAGTTTCCCGATACTACACATTCTTGGGTTAATAGAAGCATGACACTCGAGGAATGCAAGGTTAAGTGTCGGGAAAATTGTTCGTGCACGGCTTATGCAAACTTGGACATAAGAGGAGCAGGAAGTGGGTGTTCTATTTGGTTCGGCGATCTTATTGATTTGAAAGTTGTTTCACAAAGTGGACAATATCTGTATATTCGAATAGCAGATTCACAGACAGATTCTAAAGATGCCCATAAGAAGAAGGCATTGTTGCTGATAGGTACCACTGTTGCTCCTATTGCTCTTGTGGTACTACTGGCAATCTTCTACTACTACAGGAGAAAAAGGAAGTATGAAGTAGAAAAGAAAAGTGAAGTTGGTGGACAAGAAGATAGTATGGAATTGCCATTGTTTGATCTTGCTACAATAGTTAATGCTACCAACAACTTCTCAACTGACAACAAACTTGGGCAGGGTGGGTTTGGGCCTGTATACAAGGGTGTATTAGTAGACGGACAAGAAATTGCTGTTAAAAGGCTATCAAGGAGTTCTGGACAAGGATTAACAGAATTTAAGAACGAAGTCATATTGTGTGCCAAACTCCAACATCGAAATTTAGTTAAAGTTCTTGGTTGTTGCATTGAAGGGGAGGAGAAAATGCTTCTCTATGAATATATGCCTAACAGAAGTCTAGATTCATTTCTTTTTGGTTAG 1776 0.4268 MAIFILTLIICNLLFLLSKASSTDTLTLSQSLPDGTTLVSKDETFELGFFSLRNSTNRYVGIWFKNIPVKTIVWVANRDHPLKDNSTKLTITCDGNLVLLTKNNTVHWSTNTTTKPLRPTLQLLNTGNLILRNDNDDNNSINNEEKFLWQSFDYPCDTLLPGMKLGWNKKTGLNRRVTAWKNWDDPSAGNFTWGITFDSNPEMVLWNGTSKYHRSGPWNGVRFSGAFGGSNSLTTHPLFVYKLVNNNNDEAYYSYSSINKSLISIVVMNQTLFRRQRIIWIPENGTWRLFQTAPRDICDTYNPCGSYANCMVDASPVCQCLEGFEPKSSETMDLAQGCVRREPWRCKVEGRDGFRKFIGLKFPDTTHSWVNRSMTLEECKVKCRENCSCTAYANLDIRGAGSGCSIWFGDLIDLKVVSQSGQYLYIRIADSQTDSKDAHKKKALLLIGTTVAPIALVVLLAIFYYYRRKRKYEVEKKSEVGGQEDSMELPLFDLATIVNATNNFSTDNKLGQGGFGPVYKGVLVDGQEIAVKRLSRSSGQGLTEFKNEVILCAKLQHRNLVKVLGCCIEGEEKMLLYEYMPNRSLDSFLFG 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00706 591 Gene3D - 18 152 IPR036426 -
Spst11g00706 591 CDD PAN_AP_plant 346 429 - -
Spst11g00706 591 Pfam PAN-like domain 346 414 IPR003609 -
Spst11g00706 591 SUPERFAMILY Protein kinase-like (PK-like) 489 590 IPR011009 -
Spst11g00706 591 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 589 - -
Spst11g00706 591 Gene3D Hepatocyte Growth Factor 345 426 - -
Spst11g00706 591 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 345 428 - -
Spst11g00706 591 CDD B_lectin 29 155 IPR001480 -
Spst11g00706 591 SMART ntp_6 349 428 IPR003609 -
Spst11g00706 591 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 468 579 - -
Spst11g00706 591 ProSiteProfiles EGF-like domain profile. 294 330 IPR000742 -
Spst11g00706 591 Pfam Protein tyrosine and serine/threonine kinase 506 589 IPR001245 GO:0004672|GO:0006468
Spst11g00706 591 ProSiteProfiles PAN/Apple domain profile. 346 429 IPR003609 -
Spst11g00706 591 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Spst11g00706 591 Pfam S-locus glycoprotein domain 214 328 IPR000858 GO:0048544
Spst11g00706 591 ProSiteProfiles Protein kinase domain profile. 504 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00706 591 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 152 - -
Spst11g00706 591 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 186 IPR036426 -
Spst11g00706 591 Gene3D Phosphorylase Kinase; domain 1 465 579 - -
Spst11g00706 591 SMART blect_4 29 155 IPR001480 -
Spst11g00706 591 Pfam D-mannose binding lectin 71 181 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00706 Spst-Chr11 30113183 30115515 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00706 428 590 Receptor kinase-like Gene Family AT4G04500 47.853 2.25e-40 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst11g00706 S_locus_glycop 1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00706 - - pvu:PHAVU_011G152200g 1058.13