Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00703 ATGTCCATCAAGTCTAACATCAAGTCCTTGAATGTTCAACACAACAAGGATGAATTTTACGTTACATATGGCATAAATGATAAGTCAATGATTTCAAGAATTGTGATGAATCAAACAGATCATGTTCGTAAGCGCTTGACGTGGGATGGTCACATGTGGAGGGCGTCTTCAATGTTGCCAAGTGATTTATGCGATGGGGAAAAGAATAAAGATAGTTTTCTCAGACTTAGTAACGTGAAGGCACCAGAAGCTACAATTTCATGGGTTAATGCAAGTATGAAACTTGGGGAATGCAAGAACAAATGCATGAAAAATTGCTCCTGCACAGCTTATGCAAATGCAGAAATAAGAAAAGGCAGTGGGTGTGCCATTTGGGTAGGTGATCTTCTAGATATAAGAATCATGCCAAATGCTGGACAAGATCTTTATATTAGATTGGCCGTGGCTGAAACAGAAATCCTCGCTAGATTCAAAGGAGTGAAAAATGAAAATCAACAAGGCTTTGAGCTACCTTTGTTTGACTTTGCCACAACAACATATGCAACAAATCACTTCTCAAATCACAATAAGCTTGGCGAAGGTGGTTTTGGGCCTGTATATAGGGGAACACTACCAGATGGACGAGAGATCGTTGTTAAGAGGCTTTTACAAAAATCTAGACAAGGATTAAAAGAATTTAAGAATGAGGTTATGTTATGTGCGAAACTTCAACATCGAAATCTTGTTAAAGTTCTTGGATGTTGCATTCAGGATAATGAGAAATTACTTCTGTATGAATATATGGCCAACAAAAGCTTAGACTTCTTTCTTTTTGGTTAG 819 0.3773 MSIKSNIKSLNVQHNKDEFYVTYGINDKSMISRIVMNQTDHVRKRLTWDGHMWRASSMLPSDLCDGEKNKDSFLRLSNVKAPEATISWVNASMKLGECKNKCMKNCSCTAYANAEIRKGSGCAIWVGDLLDIRIMPNAGQDLYIRLAVAETEILARFKGVKNENQQGFELPLFDFATTTYATNHFSNHNKLGEGGFGPVYRGTLPDGREIVVKRLLQKSRQGLKEFKNEVMLCAKLQHRNLVKVLGCCIQDNEKLLLYEYMANKSLDFFLFG 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00703 272 CDD PAN_AP_plant 64 147 - -
Spst11g00703 272 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 150 260 - -
Spst11g00703 272 Pfam PAN-like domain 64 132 IPR003609 -
Spst11g00703 272 ProSiteProfiles PAN/Apple domain profile. 64 147 IPR003609 -
Spst11g00703 272 ProSiteProfiles Protein kinase domain profile. 185 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00703 272 SUPERFAMILY Protein kinase-like (PK-like) 165 271 IPR011009 -
Spst11g00703 272 Pfam Protein tyrosine and serine/threonine kinase 187 270 IPR001245 GO:0004672|GO:0006468
Spst11g00703 272 Gene3D Phosphorylase Kinase; domain 1 149 260 - -
Spst11g00703 272 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 71 270 - -
Spst11g00703 272 SMART ntp_6 68 146 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00703 Spst-Chr11 29974955 29978671 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00703 173 271 Receptor kinase-like Gene Family AT4G23130 62.626 3.03e-36 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst11g00703 PK_Tyr_Ser-Thr 7.6e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00703 - - mesc:110612134 273.092