Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00702 ATGGCCATTCTTACTATTCTCCTTCTCTTTTGCAAGTTATTTTTGTTTTTCTGTAAATTTTCTGTCGCTAAAGATACCATTACCCAGTTTGAGCCACTTGAAGATAACAAGACCTTGGTTTCAAACGATGGAACCTTTGAGTTGGGTTTCTTCACCCCAGCTACCACTTCCTCAAACCGCTATCTAGGAATCTGGTACGCAAACATACCTTTCAGAACTGTGGTTTGGGTTGCAAACCGTGACATTCCTATCACAGACAACTTCACCAAGTTGAGGATAAATACACAGGGCAACCTCGTACTAGTTAACCAGAACAACACCGTTATTTGGTCAACAAACGCAACAACAAAAGGGGTGGTTGTCGCTGCACAAATTTTGGACTCAGGAAACCTGGTTCTAAGAGATGAGAAAGACACCAACCCTGAAAACTACTTGTGGGAGAGCTTTGACTATCCTTCAGACACGTTTCTACCTGGAATGAAAATGGGATGGGACTTCAAGAAAGGCCTTATAGGCACAACTGAGTACTACAGAAGTGGCCCATGGGATGGCACTAAATTCGTTGGCAACCCCTCTTCCTCCAACTCAGTAATAAACTACACGTTTGTGTCTGACAAGGATGGATACTACATCACATATAGTATAAATGATAAGTCAATGATTTCAAGGCTTGTGTTGAATCAAACGCTTTATCTTCGTCGTCAGCGCTTGACATGGAATAATGATAGTCAAACGTGGAGGGTGTCCTCACAGTTGCCAAGTGATTTATGCGACGTCTATAATACTTGTGGCGCGTTTGGGATTTGTGTCGTTAGTGAGTCACCGGTGTGCAAGTGTTTAGATGGATTCAAGCCAAAAGCACCCCAAAATTGGACCCAGACAAACTTTCACGAAGGGTGTGTGCACAACCATAGTTGGAGCTGCGGGGAAAACAAGGACGGTTTTCAGAAGTTCAGTAACGTGAAGGCACCAGAAACTACAAGGTCATGGGTGAATGCAAGTATGACACTTGAGGAATGCAATAAGAAATGCAGGGAAAATTGTTCCTGTACAGCTTATGCAAATACAGACATGAGAGGAGAAGGTAGTGGATGCGCCATTTGGTTTGGTGATCTTTTAGATGTAAGACTCATTCCGAGTGGTGGACAAGATCTGTATATCAGATTGGCCGTGTCCCAAATAGATGGGCAAGAGTTAGCTGTTAAGAGGCTTTCACAAACATCTGGACAAGGATTAAAAGAATTTAAGAATGAAGTTATGTTATGTGCCAAACTCCAACATCGAAATCTCGTTAAAGTTCTTGGATTTTGCATTCGAGAAGATGAGAAATTGCTTATATATGAATACATGGCCAACAAAAGCTTAGACTTTTTTCTTTTTGGTTAG 1386 0.4185 MAILTILLLFCKLFLFFCKFSVAKDTITQFEPLEDNKTLVSNDGTFELGFFTPATTSSNRYLGIWYANIPFRTVVWVANRDIPITDNFTKLRINTQGNLVLVNQNNTVIWSTNATTKGVVVAAQILDSGNLVLRDEKDTNPENYLWESFDYPSDTFLPGMKMGWDFKKGLIGTTEYYRSGPWDGTKFVGNPSSSNSVINYTFVSDKDGYYITYSINDKSMISRLVLNQTLYLRRQRLTWNNDSQTWRVSSQLPSDLCDVYNTCGAFGICVVSESPVCKCLDGFKPKAPQNWTQTNFHEGCVHNHSWSCGENKDGFQKFSNVKAPETTRSWVNASMTLEECNKKCRENCSCTAYANTDMRGEGSGCAIWFGDLLDVRLIPSGGQDLYIRLAVSQIDGQELAVKRLSQTSGQGLKEFKNEVMLCAKLQHRNLVKVLGFCIREDEKLLIYEYMANKSLDFFLFG 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00702 461 Pfam Protein tyrosine and serine/threonine kinase 396 459 IPR001245 GO:0004672|GO:0006468
Spst11g00702 461 CDD B_lectin 31 152 IPR001480 -
Spst11g00702 461 Pfam PAN-like domain 308 375 IPR003609 -
Spst11g00702 461 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 172 IPR036426 -
Spst11g00702 461 SMART ntp_6 310 389 IPR003609 -
Spst11g00702 461 FunFam Uncharacterized protein 385 449 - -
Spst11g00702 461 ProSiteProfiles PAN/Apple domain profile. 308 390 IPR003609 -
Spst11g00702 461 PIRSF SLG 171 403 IPR035446 -
Spst11g00702 461 PIRSF SLG 1 176 IPR035446 -
Spst11g00702 461 SUPERFAMILY Protein kinase-like (PK-like) 370 460 IPR011009 -
Spst11g00702 461 Gene3D - 19 149 IPR036426 -
Spst11g00702 461 ProSiteProfiles Protein kinase domain profile. 353 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00702 461 Gene3D Phosphorylase Kinase; domain 1 376 449 - -
Spst11g00702 461 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 7 459 - -
Spst11g00702 461 Pfam D-mannose binding lectin 73 170 IPR001480 -
Spst11g00702 461 ProSiteProfiles EGF-like domain profile. 253 289 IPR000742 -
Spst11g00702 461 Pfam S-locus glycoprotein domain 177 286 IPR000858 GO:0048544
Spst11g00702 461 ProSiteProfiles Bulb-type lectin domain profile. 24 146 IPR001480 -
Spst11g00702 461 CDD PAN_AP_plant 307 390 - -
Spst11g00702 461 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 307 389 - -
Spst11g00702 461 SMART blect_4 30 152 IPR001480 -
Spst11g00702 461 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00702 Spst-Chr11 29936500 29939002 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00702 395 460 Receptor kinase-like Gene Family AT4G23130 69.697 1.03e-24 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst11g00702 S_locus_glycop 4.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00702 - - gmx:100786696 607.446