Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00692 ATGATAGAAACCGTACAAAACTCAATGGAAAGCTTTGAAATGCTTGGTGTATGCCTTCTGTTCCTCTCCTTGGTAACCATGTGTTCCACTTTGGAGTTGATTACTCCGACCCAACCCCTGAGAGATAGTAAGAATGAGAATGGAACTCTTGTCTCAACAAATGGAACCTTTGAAGCAGGATTCTTCAGCCGTGAAAATTCCGGTAGCCGTTACCTTGGAATTTGGTACAAAAACATATCCCCTAGAACAGTTGTCTGGGTAGCCAACAAAGAAACACCACTTCAAGACCACTCCGGAGTCTTAGAAGTAGACAGTAAAGGGTTTCTTAGTATCAAAGATGGTACAGGAGCCAAAATATGGTCCTCAAATACATCACAGACACCAAGCAAGTCAGCTGTTATGGAGTTGTTAGAATCAGGAAACATGGTTGTGAAAGATAGCCATAACAACTTTTTATGGCAAAGCTTTGATTACCCTGATGACACTTTACTTCCAGGAATGAAACTTGGAAGGAACTTCAAAACTGGTCATCATCGAGCTCTAAGATCTTGGACATCCTTAGAAGATCCTACTCCAGGTCAATTTTCATTTGGTGTTGATACTCGTGGCCTTCCTCAATTAGTCATAAAAAACGAGACTAGTGATGACATAGTTTATAGACCAGGGTCATGGAATGGTCTTAGTGTCACAGGACTACCTGGAGAAATAACTGACCCCTTAATTAAATCCCTTTTTGTTATGAATGAAGATGAAGTCTTCTATGAGTTTGAACTCTTGAAGAGTTCAACTAAACTGAGAAGCCGATTGACCCCAGAAGGGTATCAAGTACGTTTAGTATGGTCAGATCAGAGTAAAAAATGGGATACCCACTTTCCTGGTCCATTTGATGTGTGTGAGAGATATGCCTTGTGTGGTGCAAATACTATTTGCAATGTGAGTGGAACAAGTCAACACTGTGAATGCTTGAGTGGATTCCATTCCAACTTTGCAGATTCAACTTGTGATCGAACAACCCCTCTAGATTGTAACAAGGGAGATAAATTTCAGAAGTACCGGGGAATGAAATTGCCAGACACATCTTCATCTTGGTTTGATAAGACAACTAGTCTTCAGGAATGTGAGAAATTGTGCTTGAGCAACTGCTCTTGTACTGCATATGCTCAATTGAATATCAGTGGCGAGGGAAGTGGTTGCTTGCATTGGTTTCATGACATTATTGACATCAGGATACTACCACAGGGTGGACAAGATTTTTATCTACGAATTACAGCTTCAGAGTTTCAAGATCGCGGTTTCAACAGGAAGATAGCAGGAATTGTTGTTGGCTGTACTATATTCATCATTACAATTATAGTATTTGGATTGGTATTTTGCATTAAGAGGAAGAAACTGAAGCAATCAGAAACAAATTACTGGAAGGACAAGAATAAGAAGGATAACATTGATTTACCAATATTCGACTTTTTATCCATCTCCAAGGCCACAAATAACTTTTCTCAGAGTAACAAATTGGGAGAAGGGGGATTTGGACCGGTGTACAAGGGCATATTATCTGATGGGCAAGAAATTGCAGTTAAGAGGCTTTCCAAAACTTCTGGACAAGGTTTGGACGAGTTCAAGAATGAAGTCATGTTGATTGCAAACCTTCAACACCGGAATCTTGTAAAGCTTCTTGGTTGTTCCATTCAGCAAGATGAAAAGATGTTAATTTATGAATTCATGCCAAATAGAAGCTTGGACTACTTTATTTTTGATTCAACCAGACAAACATTAATAG 1777 0.3945 MIETVQNSMESFEMLGVCLLFLSLVTMCSTLELITPTQPLRDSKNENGTLVSTNGTFEAGFFSRENSGSRYLGIWYKNISPRTVVWVANKETPLQDHSGVLEVDSKGFLSIKDGTGAKIWSSNTSQTPSKSAVMELLESGNMVVKDSHNNFLWQSFDYPDDTLLPGMKLGRNFKTGHHRALRSWTSLEDPTPGQFSFGVDTRGLPQLVIKNETSDDIVYRPGSWNGLSVTGLPGEITDPLIKSLFVMNEDEVFYEFELLKSSTKLRSRLTPEGYQVRLVWSDQSKKWDTHFPGPFDVCERYALCGANTICNVSGTSQHCECLSGFHSNFADSTCDRTTPLDCNKGDKFQKYRGMKLPDTSSSWFDKTTSLQECEKLCLSNCSCTAYAQLNISGEGSGCLHWFHDIIDIRILPQGGQDFYLRITASEFQDRGFNRKIAGIVVGCTIFIITIIVFGLVFCIKRKKLKQSETNYWKDKNKKDNIDLPIFDFLSISKATNNFSQSNKLGEGGFGPVYKGILSDGQEIAVKRLSKTSGQGLDEFKNEVMLIANLQHRNLVKLLGCSIQQDEKMLIYEFMPNRSLDYFIFDSTRQTLI 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00692 592 Pfam D-mannose binding lectin 83 184 IPR001480 -
Spst11g00692 592 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 462 573 - -
Spst11g00692 592 Pfam PAN-like domain 342 408 IPR003609 -
Spst11g00692 592 Pfam S-locus glycoprotein domain 219 328 IPR000858 GO:0048544
Spst11g00692 592 ProSiteProfiles PAN/Apple domain profile. 342 423 IPR003609 -
Spst11g00692 592 CDD B_lectin 47 159 IPR001480 -
Spst11g00692 592 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 19 588 - -
Spst11g00692 592 SMART ntp_6 343 422 IPR003609 -
Spst11g00692 592 Gene3D Phosphorylase Kinase; domain 1 471 573 - -
Spst11g00692 592 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 189 IPR036426 -
Spst11g00692 592 SUPERFAMILY Protein kinase-like (PK-like) 478 588 IPR011009 -
Spst11g00692 592 Gene3D - 32 156 IPR036426 -
Spst11g00692 592 ProSiteProfiles Protein kinase domain profile. 498 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00692 592 SMART blect_4 41 159 IPR001480 -
Spst11g00692 592 Pfam Protein tyrosine and serine/threonine kinase 500 586 IPR001245 GO:0004672|GO:0006468
Spst11g00692 592 Gene3D Hepatocyte Growth Factor 339 418 - -
Spst11g00692 592 CDD PAN_AP_plant 338 422 - -
Spst11g00692 592 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 156 - -
Spst11g00692 592 ProSiteProfiles Bulb-type lectin domain profile. 35 157 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00692 Spst-Chr11 29743534 29746554 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00692 437 590 Receptor kinase-like Gene Family AT4G23190 51.266 6.79e-44 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst11g00692 S_locus_glycop 2.6e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00692 - - vum:124820888 961.059