Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00684 ATGGATGGGAGAGTGGTGGCTGTGAAAAGGCTATCGAAGAAATCTGGACAAGGCTTGGAGGACTACTTTGTTTTTGAAGATATGGTGCTGGAACTACTTGAGGATGTGTTAGAAGAACAATACACACCTTCTGAAGTTATACGATGCGTACAAGTAGGCCTATTATGCGTGCAACAAAGACCACAAGATAGGCCAGACAGGTATGATTCATTCAACGTTTCACATATGCAAGGGAACATAAAGTTGAATTCCATAGCGTATGCGGTTTGCTGGGTTAGATTTGGATTGGAGGCAAATATCGTTGACTTACCTGTCTTCCTACAACAAATGACTTTGTCATGTCATTGCTTCCCTATTGTCACAATGTTGTGTGTTTGGTTTTTATTGTTCATGTGCATGTGGGGAACATGCACATCACTGGATACTTTGAAACTGAATCAAACCATCCGAGATTGCGAGAACGAGACTTTGGTTTCAGCTGGTGGAACTATTGAACTGGGTTTCTTGAGCCTGGGAAAATCATCACGAAGATACTTAGCTATATGGTATAGAAATGTATCCCCTTCAACAGTGGTGTGGGTTGCTAATCGAAATACACCTCTTGATAATAAATCAGGTGTTCTCAAGCTCAATGACAAAGGAGTTCTCGTGCTAATCAGTGGCGCACACAGCACTATTTGGTCATCCAACATATCAGGCAAAGCAGTGAATGATCCAATTGCTCAGCTCTTGGATTCGGGAAATTTTGTAGTCAAATTTGGACAAGGTACCAGCAAGGAGAGTAGTATCTTGTGGCAGAGTTTTGATGAAATTGGTGATACAATTTTGCCTGGAATGAAGCTTGGATGGAACTTAGAAACTGGTGTAGAAAGATATATATCATCTTGGAAAGGTGTTGACAATCCCGCTGAGGGAGAATATAGTCTAAAAATTGACAGTAGAGGTTATCCTCAAGCAATTATATTCGAGGGATCAAAGATAAAGTACAGACTTGGGCCATGGAATGGCGAGTCATGGGCAGGGTATCCTGTTAAAATTCCTCAAAGTTCGGAAATATTTGTATTCAATAAAACAGACTTGTATTATGAGTTCAAGCTTCTTGGTAGTTCGGACTTGATCAGCATAGTTAAACTAACCCCATCTGGCATTGGAAACAGAATTTTTTGGACAACTGATACCACCAGCCAGAGAAGTCTCTTGCTTCAGGAGAGAGATCAATGCGAGAATTATGCATTCTGTGGTGCAAATTCTATATGCAATTATGATGGTAACCATCCAACTTGTGAATGCGTGAGAGGTTATGTTCCAAAGTCTCCTGATCAGTGGAATACATCAATTTGGCACAGCGGTTGTGTTCCAAGGAATAAATCTAATTGCAAAACCAGTTATACAGATGGCTTCTTACCGTACTCACACATGAAATTGCCAGACACATCTTCTTCGTGTCGTGAAGGAAGTGGCTGCCTACATTGGTTCAATACCCTAGTTGACTTGAGGAGTTTCTCTCAATTGGGGCAAGACATTTACATCAGAGTCCCTGCCTCAGAATTAGATCACGGTAGCCATGGAAACATGAAGAATAAGATAGTAGGAATCACTGGTACACTGCTAGATGGGCAAGAGGTGGCAGTAAAACGGAACTCAAAGATGTCTGATCAAGGGCTGGACGAGTTTAAAAATGAAGTTGTTTTGATTGCAAAACTTCAACACCGTAATCTTGTGAAACTTTTAGGTTGCTGCATTCAAGGAGAGGAAAAATTGTTGATCTATGAATACATGCCTAACAAGAGCTTAGACTACTTCATCTTTGGTTAG 1815 0.4083 MDGRVVAVKRLSKKSGQGLEDYFVFEDMVLELLEDVLEEQYTPSEVIRCVQVGLLCVQQRPQDRPDRYDSFNVSHMQGNIKLNSIAYAVCWVRFGLEANIVDLPVFLQQMTLSCHCFPIVTMLCVWFLLFMCMWGTCTSLDTLKLNQTIRDCENETLVSAGGTIELGFLSLGKSSRRYLAIWYRNVSPSTVVWVANRNTPLDNKSGVLKLNDKGVLVLISGAHSTIWSSNISGKAVNDPIAQLLDSGNFVVKFGQGTSKESSILWQSFDEIGDTILPGMKLGWNLETGVERYISSWKGVDNPAEGEYSLKIDSRGYPQAIIFEGSKIKYRLGPWNGESWAGYPVKIPQSSEIFVFNKTDLYYEFKLLGSSDLISIVKLTPSGIGNRIFWTTDTTSQRSLLLQERDQCENYAFCGANSICNYDGNHPTCECVRGYVPKSPDQWNTSIWHSGCVPRNKSNCKTSYTDGFLPYSHMKLPDTSSSCREGSGCLHWFNTLVDLRSFSQLGQDIYIRVPASELDHGSHGNMKNKIVGITGTLLDGQEVAVKRNSKMSDQGLDEFKNEVVLIAKLQHRNLVKLLGCCIQGEEKLLIYEYMPNKSLDYFIFG 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00684 604 CDD PAN_AP_plant 456 513 - -
Spst11g00684 604 ProSiteProfiles Bulb-type lectin domain profile. 142 264 IPR001480 -
Spst11g00684 604 SUPERFAMILY Protein kinase-like (PK-like) 517 603 IPR011009 -
Spst11g00684 604 CDD B_lectin 154 269 IPR001480 -
Spst11g00684 604 Pfam D-mannose binding lectin 190 297 IPR001480 -
Spst11g00684 604 Pfam S-locus glycoprotein domain 329 438 IPR000858 GO:0048544
Spst11g00684 604 Pfam Protein tyrosine and serine/threonine kinase 517 602 IPR001245 GO:0004672|GO:0006468
Spst11g00684 604 SMART blect_4 146 271 IPR001480 -
Spst11g00684 604 ProSiteProfiles EGF-like domain profile. 403 440 IPR000742 -
Spst11g00684 604 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 135 268 - -
Spst11g00684 604 Gene3D - 137 268 IPR036426 -
Spst11g00684 604 Gene3D Phosphorylase Kinase; domain 1 515 592 - -
Spst11g00684 604 SUPERFAMILY alpha-D-mannose-specific plant lectins 191 301 IPR036426 -
Spst11g00684 604 FunFam Cysteine-rich receptor-like protein kinase 11 519 592 - -
Spst11g00684 604 ProSiteProfiles Protein kinase domain profile. 498 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00684 604 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 123 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00684 Spst-Chr11 29091820 29098890 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00684 534 603 Receptor kinase-like Gene Family AT4G11460 71.429 6.02e-25 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst11g00684 S_locus_glycop 7.1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00684 - - ccaj:109807095 582.408