Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00682 ATGACAAGAACTTTCTCTTTGCGAGACCATTTAGCAGTGAATCAATCTATCCAAGCCAGTGAGACTTTGGTTTCAGCTGGTGGAATTGTTGAAATGGGTTTCTTCAGTCCCAGAAACTCAACAAGACGATACTTGGGTCTATGGTACAGAAACGTATCCCCTTTCTCAGTGGTTTGGGTGGCTAACCGAAACACACCTCTTGAGAGTAACTCGGGAGTTCTCAAACTCAATGAAAAAGGGATTCTTGTGCTTCTCAATGGCGCAAATAAAACCATTTGGTCGTCCAATATATCAGACACTGCAGTGAGTAACCCAATTGCACAGCTTTTAGATTCGGGGAATCTGATAGTGAAAAGTGGATGGGAAACCAACAACGAGAACTTTTTATGGCAGAGTTTTGACCATCTATGTGATACATTTCTGGCAGGAATGAAACTTGGATGGAACTTAGAAACTGGTCTAGAAAGGTTTTTACTATCTTGGAAAAGTGTTGATGATCCTTCTGAGGGAGAATATAGTATGAAAATCGACCTTAGAGGATTTCCTCAAGCAGTTATACTTGATGGATTTGAGATAAAGATAAGAGTAGGGTCATGGAATGGCCAGTCTTGGGCTGGATATCCTGTTTCAAGTCCTGGAAGTTCACAAACATTTGTGTTCAATGAAAAAGAGGTGTATTATGAGTTCGGGCATGTTGATAGTTCGGTCTACACCGTACTTACAATGAACCCGTTAGGTGCTTCACAGAGAATTTTTTGGACAACTCAAACAAGAACCAGGCAAGTGATCTCATCTGGGGAGGAAGATCAATGTGAGAATTATGCCTTTTGTGGGGCTAATGCTGTATGCAGTTATGATGGTAACCATCCAAGCTGCGAATGCGTGAAAGGATATGTTCCCAAGAATCCTCAATACTGGAATTTATCAGTTTGGTCTGATGGTTGTGCTCCAAGAAATAAATCTAATTGCAAAAACAGTTCTACATATGGCTTCTTAAAGTACACAGACATGAAATTGCCAGACACATCTTCATCATGGTTTAGTAGGACAATGAACCTTGAGGATTGTCAGAAGCAGTGTCTGGAAAACTGTTCTTGTGTAGCTTGTGCTAATTTAGATGTTCGTGGTGGAGGAAGTGGCTGTCTACTTTGGTTTAATAGTCTGGTTGACTTGAGAAAATTCTCTCAATGGGGACAAGACCTTTATATCAAAGTCCCTACTTCAGAGCTAGATTATGTTGCAGCTGAAGCTCGCCGTAGAAATGTCAAGAAAAAAATAGTAGGAATCACTGTTGGTGCAACTATTTTTGGAATCATCATCACATGTGTATGCATCTTGATAATTAAAAATCCAGGGGCTGCAAGAAAATTTTATATCAAGCATTACAAAAATATACAAACAATGGAAGTCATGGATTTACCAACTTTTGATTTCTCAGTCTTATCTAATGCCACTAGAAACTTTTCGACCGAAAACAAACTTGGAGAAGGAGGCTTTGGACCAGTATACAAGGCCACACTGGTAGATGGGAGAGAGCTAGCTGTGAAAAGGCTTTCAAAGATGTCTGGACAAGGGTTGGATGAGTTTAAAAATGAAGTCGCATTGATTGCCAAACTTCAGCACCGCAATCTTGTAAAACTTCTTGGTTGCTGCATTGAAGGAGAAGAGAAAATGTTGATTTATGAATACATGCCCAATCAAAGTTTGGACTACTTTGTTTTTGGTCGAGCCCTTACGATCTATTCTAATTTCACATGGCAATCTTCTTATGTTTTTTTGTTTATGATTAATGAAATTATGGAAACTGCAACTGCTATGCTCATTACGTGTTTGTATTTGACTAGATAA 1848 0.3929 MTRTFSLRDHLAVNQSIQASETLVSAGGIVEMGFFSPRNSTRRYLGLWYRNVSPFSVVWVANRNTPLESNSGVLKLNEKGILVLLNGANKTIWSSNISDTAVSNPIAQLLDSGNLIVKSGWETNNENFLWQSFDHLCDTFLAGMKLGWNLETGLERFLLSWKSVDDPSEGEYSMKIDLRGFPQAVILDGFEIKIRVGSWNGQSWAGYPVSSPGSSQTFVFNEKEVYYEFGHVDSSVYTVLTMNPLGASQRIFWTTQTRTRQVISSGEEDQCENYAFCGANAVCSYDGNHPSCECVKGYVPKNPQYWNLSVWSDGCAPRNKSNCKNSSTYGFLKYTDMKLPDTSSSWFSRTMNLEDCQKQCLENCSCVACANLDVRGGGSGCLLWFNSLVDLRKFSQWGQDLYIKVPTSELDYVAAEARRRNVKKKIVGITVGATIFGIIITCVCILIIKNPGAARKFYIKHYKNIQTMEVMDLPTFDFSVLSNATRNFSTENKLGEGGFGPVYKATLVDGRELAVKRLSKMSGQGLDEFKNEVALIAKLQHRNLVKLLGCCIEGEEKMLIYEYMPNQSLDYFVFGRALTIYSNFTWQSSYVFLFMINEIMETATAMLITCLYLTR 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00682 615 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 3 133 - -
Spst11g00682 615 ProSiteProfiles Protein kinase domain profile. 488 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00682 615 Pfam PAN-like domain 323 391 IPR003609 -
Spst11g00682 615 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 322 405 - -
Spst11g00682 615 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 586 - -
Spst11g00682 615 SMART blect_4 14 136 IPR001480 -
Spst11g00682 615 CDD PAN_AP_plant 320 406 - -
Spst11g00682 615 SMART ntp_6 326 405 IPR003609 -
Spst11g00682 615 Gene3D Phosphorylase Kinase; domain 1 452 563 - -
Spst11g00682 615 Gene3D - 3 134 IPR036426 -
Spst11g00682 615 SUPERFAMILY Protein kinase-like (PK-like) 461 583 IPR011009 -
Spst11g00682 615 Pfam Protein tyrosine and serine/threonine kinase 490 573 IPR001245 GO:0004672|GO:0006468
Spst11g00682 615 Pfam D-mannose binding lectin 57 162 IPR001480 -
Spst11g00682 615 SMART tyrkin_6 488 611 IPR020635 GO:0004713|GO:0006468
Spst11g00682 615 ProSiteProfiles PAN/Apple domain profile. 323 406 IPR003609 -
Spst11g00682 615 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 453 563 - -
Spst11g00682 615 Pfam S-locus glycoprotein domain 195 302 IPR000858 GO:0048544
Spst11g00682 615 Gene3D Hepatocyte Growth Factor 322 402 - -
Spst11g00682 615 ProSiteProfiles Bulb-type lectin domain profile. 8 130 IPR001480 -
Spst11g00682 615 SUPERFAMILY alpha-D-mannose-specific plant lectins 57 167 IPR036426 -
Spst11g00682 615 ProSiteProfiles EGF-like domain profile. 267 304 IPR000742 -
Spst11g00682 615 CDD B_lectin 14 135 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00682 Spst-Chr11 29049940 29052335 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00682 428 574 Receptor kinase-like Gene Family AT4G23190 50.000 4.29e-38 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst11g00682 PK_Tyr_Ser-Thr 4e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00682 - - gmx:100819157 813.527