Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00681 ATGTCTTACACCGACTCCATTGTTGTCATTATGTTGACATCGAGGATTGAGGCTGTTGGAAGACGAAGGTTGTTGGAAGAAGAACAGGGTTTACGACACGAAACAATTACAAAATGGCTGGATCCAGAAGCTGCTGCGCTCAGCCGAGATGCCTTGGCAAAGATTGTGTACTCAAGATTGTTTGACTGGTTGGTTGATAAAATTAATAATTCTATTGGTCAAGACCCTGAATCAAAATCCTTAATTGGTGTGCTGGTTATTTATGGCTTTGAGAGTTTCAAGGCTAACAGGTTTGTAACTGGCACACCTTTTGTTGTGTAA 321 0.4112 MSYTDSIVVIMLTSRIEAVGRRRLLEEEQGLRHETITKWLDPEAAALSRDALAKIVYSRLFDWLVDKINNSIGQDPESKSLIGVLVIYGFESFKANRFVTGTPFVV 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00681 106 Pfam Myosin head (motor domain) 22 98 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst11g00681 106 PANTHER MYOSIN 29 98 - -
Spst11g00681 106 ProSiteProfiles Myosin motor domain profile. 1 106 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst11g00681 106 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 98 IPR027417 -
Spst11g00681 106 Gene3D Myosin VI head, motor domain, U50 subdomain 10 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00681 Spst-Chr11 29033504 29036025 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00681 32 98 Myosins gene family AT1G04160 82.090 4.90e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00681 K10357 - gmx:100795648 125.946