Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00680 ATGAATGCTATAGCGAGCGTGATATCAAGCGTGGCTGCACCTCTGCTGCGAAACATCACCTACGTGTTGATGTACAACAGTTACCTGACGGAGCTGGAAAGCGAGATTCAGAAGCTGCAGAGTGAGGAGAAGGAAGTGAGGCACACGGTTGAAGCTGCCAAGAGGGGTGGTGAAGAGATCGAAGACACCGTGCGTGACTGGTTCAACCGAGTGCGTGCAGCTGTGGAGCAGGGGCAGGCATTCCTTCAGGAGGAAGAGAGGGAAAGGGTTGGATGTATGGACGTGTACTTGAAGTACACTAACAGCCAGAGAGCAAGAACCTTGGTGGAGATTGTGAGGGAGGTAAGGAGTGAGACGTTCGACCGTGTTTCCTACAGGTGTGCCTTGAGATGCAATGTTGGTCCTGCTTCGAGAGAGTATGTTTCTATTCAATCGAGAACTGTGATGTTGAATGATGTTGTGAAGGTGCTGAAAGATGGTGGGGTTGACATTGTTGGAGTGTATGGGGTGGCTGGCGTGGGGAAGACTGCATTGGTGAAGGAATTGGCCTGGCAGGTTGAAAAGGATGGCTTGTTTGATGCGGTGGTGGTGGCAACGGTGACGGATTCGCCGGATGTGGGGAAGATCCGCAATGAGATTGCTGATGGGTTGGGGTTGAAGTTTGATGAGCTGACGGAGCTGGGGCGGGCGAGCCGGTTGCGCCAGAGGATCCGGCAGGAGCAGAGGATTCTTGTGGTGTTGGATGATGTGTGGGGGAAGCTTGATTTGACAAAGGTTGGTGTGCCTTTTGGTGAGGACTACAAAGGTTGTAAATGCCAGCTGTTGATCACATCCAGGAATCTTAATGTATTAAGTACTAATTTTGGGGCAGGGAAGGTTTACAGGCTTGAGGTTTTGTCTGAGGAAGAGAGTTGGGAGTTGTTTGAGAAGAGGGGAGGGGATGTGGTTAGGGATCCTAGCATTCAACCGGTGGCGGAAAAAGCAGCAAAAAGCTGTGGTGGTTTGCCTCTTCTGATAGTGACAGTGGTGGAGGAATTGAAGAACAAGGATTTATATGCTTGGAAGGATGCACTAGAGCAGATAACACGTTTTGAACTTGAAGGGTGTCTTTATTATCCTGTGAGTTCTGCTATTGAGCGGAGTTATGACCATTTGGAAAGTCAGGAACTGAAAACTTTCTTCCTGCTTTTGGGTTCCATGGGAAATAGTTGCAGCACGAGAGATTTGTTGGTGTTTGGTTGGTGCCTGGGACTGCACAAAAATGTTGATTCATTGGCAGATGGGAGAAACAGGCTTTACAAAATGATAGACAATCTGAGAGCTGCTTGTTTGTTACTGGATGAAGGGAAAAGAGATTCAATTGTAGCGCTTGAGGTGGTTCAACATGTGGCTGCCTCTATTGCATCAAGGGTCAAACCTTTCTTTACTGTGCAGAGAAACAAGGAATTGAAATGGCCCAGAATGGATTTCTTTAGAACTTGCCATCATATTTTCTTGGACTGGTGTTATATCCGCGAACTTCCTGAGGTGTTAGAATGTCCCAAATTGAAGATACTCCAAATAAATAGCCAAGGTAACTATTTGAAAATCCCTGATGATTTCTTTGTTCAGATGAAAGAATTAAAGGTGCTGAGTTTGGGCGGTCTAAATTGTACTCCATCGCTTCCTCCGTCTCTCAGTCTTTTGACACACGTCCAAGCATTGTATCTGTGTAAGTGCATGTTGGAAGACATAGCTGCTGTTGGGGAAATCACTAGTTTAGAGATTCTCAACTTCGAGAAATCTGAGCTTAAAGTGCTCCCAGCAGAAATAGGAGGATTAAGTAATCTTCGGTTCCTAGATTTGACTGATTGCTTAAAACTAGGAATAATTCCTGGCAATGTGATATCGAGGTTGACAAGCTTGGAAGAGCTCTACATGGGAAACTGTAATGTTCAAGGGGATGTCAACGAAAGCAAAAGCCAAAGCAATGATTCAAGTCTTAGTGAGTTGAAGAATTTGGATCAACTAACAACTTTGAATCTGCAGATAGAAGATACTTCAGTTTTTCCTAGAGACGTGCTTGGCTTTGGGAGACTAGAACACTACAAGATTTTGATTGGGGATGGATGGAAATGGTCTGGGGTGGAGTCTGAGAATTACAAAACTTCAAGACTTCTTAAGCTCAATTCGTGTGCAGATCCTAGCATTCTAAAGGACTATGGTATAAAGATGTTGATGAATATGGCTGAAGATTTGTATTTAGCTGAACTCAAGGGTGTTCGAGAAGTACTTTACGAATTGAATGATGAAGGGTTTTCGCAGTTGAAGTATCTTAACATCATAAACTGTGCTGAAATGGAGAGCATTATTGGCTCAACGGAGTGGGCTTATAGTGATCATGCCTTCCCAAACTTGGAATCATTGATCCTTCACAATCTGGTTAACATGGAGAGGATATGCAGTGACCCCCTTCCAGCACAGGGCTTTACGAAACTAAGAGTTATCAAAGTCACGGGTTGTGATAGGATGGAGTTTCTTTTCTCGCATTCCATGATTAAACACCTTTCTGAACTTGTTGAGATTGAGATTTCTGAATGCAAATCTATGACTAATATCCTAGCTGGGCAAAGACAACAGGATGCTGATGCTGAACAAACTGACAAGATCAGGCTCATCAACTTGCGTTCGCTTACTCTTCAATGCTTGCCGTCCCTTGTTAGTTTCTCTCCTGAGTCAAATACTGAGGCTCCTGAAAACGGAAATGGTTTCTCCAGTCAACTTTTTAATGACAAGGTTGAATTTCCAAACTTGGAGACCTTGAAGCTGTATTCAATCAATATCCACAAGATATGGAATCACCAGCTTTCTTACTTTCAAAATTTGACCTCTTTGACCATAGATGGATGTGAACGGTTAACATACATTTTCTCATACCCTGTGGCTATAAAACTTGTCAAGCTTGAACATCTTTCAATTAGTTCATGCAAATTCGTAGAGCAGATATTTGTGCCAGATGAAAACTTGGGTCACATTCATCATTTTAGAAAATCCGCTCCAACTGAACTGGTTCCAATTTTCCCCAACCTGGAGACATTTGTGCTTTCTCGATTGGACAGCTTGAAGTCAATATGGCCAGGGCTACTCCCTGACAGTTCATTCTGTAAACTGGAAAAGATGGAAATCTCATCCTGCAATAGTCTCTTGAATGTGTTCCCATGTCATGTGCTAGACAAATTACAAAGCCTGAAATCACTGAATTTATGGAACTGTATGGCACTAGAAGTTGTATATGAAATTGATAATTTAAACACAGAGCAAGAAGGTAGCAGTCAAGGAGGGTTGGACATTCCACTGACAACTTTGTCTTTGGGTAATTTACCAAAGCTAAAGCATTTGTGGAATAAGGATCCTCAAGGAAATATCAGATTTCAAAACCTGTTTATGGTAAAAGCTTCTAAATGTCAAAGTCTAAAATATGTGTTTCCACTCTCTGTGGCCAAAGATCTTCTTCATCTCCAATTCCTTGAGATAAGTGATTGTGCGGTAGAGGTAATTATTGCAAATGTTCAGGGAGGGGTAGAGGTAGCTCTTGGCTTTGTTTTCCCAGAGTTACTGTCCATAAAATTTTTTAATTTGCCTGAACTTCGATGCTTTTGTAATGGAAATCACAACCTCAGATTTCCATTGTTGACTCTATTTTATGCTGTTGAATGCCCTGCAATGGAGACTTTCTCTCGGGGAATCTTAAGGGCCTCAATCCTTAGAAAAATACATTTGACTCGGGAAGGAGATCGGTCGTGCTGGGAAGGTGACCTTAATACAACTATAAGAAAGCTCTTCAATAAAGGTACGTATGTATCAATTAGAATTCTAGATCTTTAA 3864 0.4286 MNAIASVISSVAAPLLRNITYVLMYNSYLTELESEIQKLQSEEKEVRHTVEAAKRGGEEIEDTVRDWFNRVRAAVEQGQAFLQEEERERVGCMDVYLKYTNSQRARTLVEIVREVRSETFDRVSYRCALRCNVGPASREYVSIQSRTVMLNDVVKVLKDGGVDIVGVYGVAGVGKTALVKELAWQVEKDGLFDAVVVATVTDSPDVGKIRNEIADGLGLKFDELTELGRASRLRQRIRQEQRILVVLDDVWGKLDLTKVGVPFGEDYKGCKCQLLITSRNLNVLSTNFGAGKVYRLEVLSEEESWELFEKRGGDVVRDPSIQPVAEKAAKSCGGLPLLIVTVVEELKNKDLYAWKDALEQITRFELEGCLYYPVSSAIERSYDHLESQELKTFFLLLGSMGNSCSTRDLLVFGWCLGLHKNVDSLADGRNRLYKMIDNLRAACLLLDEGKRDSIVALEVVQHVAASIASRVKPFFTVQRNKELKWPRMDFFRTCHHIFLDWCYIRELPEVLECPKLKILQINSQGNYLKIPDDFFVQMKELKVLSLGGLNCTPSLPPSLSLLTHVQALYLCKCMLEDIAAVGEITSLEILNFEKSELKVLPAEIGGLSNLRFLDLTDCLKLGIIPGNVISRLTSLEELYMGNCNVQGDVNESKSQSNDSSLSELKNLDQLTTLNLQIEDTSVFPRDVLGFGRLEHYKILIGDGWKWSGVESENYKTSRLLKLNSCADPSILKDYGIKMLMNMAEDLYLAELKGVREVLYELNDEGFSQLKYLNIINCAEMESIIGSTEWAYSDHAFPNLESLILHNLVNMERICSDPLPAQGFTKLRVIKVTGCDRMEFLFSHSMIKHLSELVEIEISECKSMTNILAGQRQQDADAEQTDKIRLINLRSLTLQCLPSLVSFSPESNTEAPENGNGFSSQLFNDKVEFPNLETLKLYSINIHKIWNHQLSYFQNLTSLTIDGCERLTYIFSYPVAIKLVKLEHLSISSCKFVEQIFVPDENLGHIHHFRKSAPTELVPIFPNLETFVLSRLDSLKSIWPGLLPDSSFCKLEKMEISSCNSLLNVFPCHVLDKLQSLKSLNLWNCMALEVVYEIDNLNTEQEGSSQGGLDIPLTTLSLGNLPKLKHLWNKDPQGNIRFQNLFMVKASKCQSLKYVFPLSVAKDLLHLQFLEISDCAVEVIIANVQGGVEVALGFVFPELLSIKFFNLPELRCFCNGNHNLRFPLLTLFYAVECPAMETFSRGILRASILRKIHLTREGDRSCWEGDLNTTIRKLFNKGTYVSIRILDL 1287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00680 1287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 396 IPR027417 -
Spst11g00680 1287 Coils Coil 22 49 - -
Spst11g00680 1287 Pfam NB-ARC domain 149 369 IPR002182 GO:0043531
Spst11g00680 1287 SUPERFAMILY L domain-like 487 865 - -
Spst11g00680 1287 PRINTS Disease resistance protein signature 605 621 - -
Spst11g00680 1287 PRINTS Disease resistance protein signature 164 179 - -
Spst11g00680 1287 PRINTS Disease resistance protein signature 237 251 - -
Spst11g00680 1287 PRINTS Disease resistance protein signature 332 346 - -
Spst11g00680 1287 Gene3D - 121 289 IPR027417 -
Spst11g00680 1287 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1112 1245 - -
Spst11g00680 1287 Gene3D Ribonuclease Inhibitor 883 1069 IPR032675 -
Spst11g00680 1287 Gene3D Ribonuclease Inhibitor 653 882 IPR032675 -
Spst11g00680 1287 Gene3D Ribonuclease Inhibitor 458 652 IPR032675 -
Spst11g00680 1287 SUPERFAMILY RNI-like 885 1088 - -
Spst11g00680 1287 Gene3D - 298 386 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00680 Spst-Chr11 29028781 29033064 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00680 139 394 WRKY Transcription Factor Family AT5G45050 29.104 1.01e-08 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00680 - - gmx:100814903 2043.47