Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00679 ATGTCTGATCAAGGATGGGAGGAGTTTAAAAATGAAGTTCTCTTGATAGCAAAACTTCAGCACCGAAATCTGGTGAAACTTCTCGGTTGTTGCATTCAAGGAGAGGAAAAAATATTGATCTATGAATACATGCCCAACAATAGCTTGGACCGCTTCATCTATGTCATGCTGAGAAAACCTTCTACTCATGTTCTGTTTCTCTTACTTTTGCATGGTCTTCATGATTGGTCCTTTCTTCCAAGCACAGCTTCCTAA 255 0.3961 MSDQGWEEFKNEVLLIAKLQHRNLVKLLGCCIQGEEKILIYEYMPNNSLDRFIYVMLRKPSTHVLFLLLLHGLHDWSFLPSTAS 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00679 84 Gene3D Transferase(Phosphotransferase) domain 1 1 65 - -
Spst11g00679 84 Pfam Protein tyrosine and serine/threonine kinase 4 55 IPR001245 GO:0004672|GO:0006468
Spst11g00679 84 SUPERFAMILY Protein kinase-like (PK-like) 3 60 IPR011009 -
Spst11g00679 84 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00679 Spst-Chr11 29026968 29028415 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00679 2 59 Receptor kinase-like Gene Family AT4G23320 65.517 2.62e-22 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst11g00679 PK_Tyr_Ser-Thr 5.5e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00679 - - aprc:113865090 98.9821