Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00670 ATGGGACCTGGGAAATACACCATTACCCCTTCATACTTGACTGGAGAATTCCCAAGGGACTATGGATGGGTGGGCACTGCTGGCTTGTCTGTTGATCCTAAAGCATTTGCAAAGAACAGGGCTCTTAAGGTGATCCACGGGCGTTGGGCTATGCTTGGACCACTAGGATGCATCACCCCAGAAGTGCTTGAGAAGTGGTTGAGAGTGGATTTCAAGGAACCAGTTTGGTTCAAAGCAGGAGCTCAAATATTCTCAGAAGGTGGTCTAGACTATTTGGGGAACCCCAACCTTGTGCATGCACAAAGCATCTTGGCAGTGCTAGGTTTCCAAGTTGTGCTGATGGGTCTTGTTGAAGGATTCCGCATCAATGGCCTTCCTGGTGTAGGAGAGGGCAATGACCTCTACCCTGGTGGCCAGTATTTTGACCCTGTCACCTTTGCTGAGCTCAAGGTTAAGGAGATCAAGAATGGTAGGTTGGCCATGTTCTCCATGTTTCGCTTCTTTGTCCAAGCCATTGTGACTGGGAAAGGACCACTTGAGAACCTTTTGGATCACCTTGACAACCCTGTGGCTAATAATGCTTGGGTCTATGCCACCAAGTTTGTGCCTGGCTCTTAA 618 0.4887 MGPGKYTITPSYLTGEFPRDYGWVGTAGLSVDPKAFAKNRALKVIHGRWAMLGPLGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPVTFAELKVKEIKNGRLAMFSMFRFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00670 205 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 7 204 IPR001344 GO:0009765|GO:0016020
Spst11g00670 205 Gene3D Chlorophyll a/b binding protein domain 3 198 - -
Spst11g00670 205 SUPERFAMILY Chlorophyll a-b binding protein 9 202 - -
Spst11g00670 205 Pfam Chlorophyll A-B binding protein 10 171 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00670 Spst-Chr11 28884747 28895641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00670 9 204 Chloroplast and Mitochondria Gene Families AT2G05070 72.414 9.92e-97 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00670 K08914 - ini:109178256 379.793