Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00667 ATGGTGTTATCGGCTTCGCCATGTTCCTTGGCGAGAAGCTCGCTGGAGGAGATGCTGGATTCGCTTCGGCGGAGGGACGAGGAGGAGGAGAAGAAGAAGGATTTGCCACCTGCCTTGCCTGCGAGGCCGACCTCGCGTGCAAGGCTTCCTCCGGCACGGCGATCACTGCCGAACAATTTTAAGGTTGGCGGCAACGAGCGCCTAGTCGTGCCGGAAAACGGACTTGTTACTAGTGAGGAGAGTGTGGTGAAGGAGAGAGATTTGGGGCAGAAGAGGAGAAGGTGTGGTTTTGGGAGCAAGAGGGTGAAGAAGGATGTGGAGTCTCCTTATGTGGCACTTTCTTCCAGCGATTCATCAGGGAATGTTTGGGAATTGGAGAGTGATGATTGTATATCTTATTTCATCAAAAAGAAGCTTCGTGTTTGGTGTAGGCAACCAAGAGGGCAGTGGGAACTAGGAGTGATACAGTCAGCTTCAGGAGAGGAAGCATCCGTGTCACTCACAAATGGAAATGTAATGACCGTAGACAGATCAGAGATTCTACCAGCAAATCCTGATGTGTTGGAGGGTGTGGATGATCTAGTTAAACTTGGTTATCTGAACGAGCCATCAGTTCTTCACAATCTTAAGTTAAGATATTCTCAAGGGATGATTTATAGTAAAGCAGGGCCAATTTTAATTGCACTCAATCCTTTCAAAGATCTTCAGATGTATGGAAATGATTATGTCTCAGCTTGTAGGCAGAGAAGTGTGGATAGTCCTCATGTTTGTGCTGTGGCAGATGCTGCTTATAACAAGATGATGAGAGATGAAGTAAATCAGTCCATTATCATAAGTGGTGAGAGTGGATCTGGGAAGACAGAAACAGCTAAAATTGCATTGCAATACTTAGCTGCACTTGGTGGTGGTGGCAATTGTGCGATAGAAAATGAATTTCTTCAGATAAATCGTATACTAGAGGCTTTTGGGAATGCAAAAACATCTAGGAATAACAACTCTAGCAGATTTGGAAAGTTGATTGAAATTCATTTCGGGTGCATGGGTAAAATATGTGGGGCGAAAATTCAAACCTTATTGTTGGAAAAGTCCAGAGTTGTTCAAGTGGCCAGTGAGAAACTGAATCTTAGAGCTGTCAATGAATATAAATATTTAGTTCAGAGTGACTGTATGTCAATTGATGGTGTTGACGATTCCAAAAACTTTCATCAGCTGATGGAAGCACTGGATGCAGTTCGAATTTGTAAAGAGGAACGGGAGCTGATCTTTAAGTTGCTTGCTGCAATACTATGGTTGGGAAATATATCATTCCAAGTAGGCAGAGGAGATCACATTGAGGTTGTTGATGATGAAGCTGTAACCAGTGCTGCCCAGCTGATGGGTTGTAGTACCCAGGAATTAGTGACAGCATTATGTAGCAATAAAATCCAAGCTGATGAGGATACTATTACCAAAAATTTGACCTTGAGGCAGGCAATTGAAAGAAGAGATGCAATTGCAACATTTGTCTATGCAAACTTGTTTGACTGGCTCTTAGACCAAGTTAACAACTCACTTGAAATGGGTAAAAAATGTACTGGGAAATCCATAAGTATCCTCGATCTTTATGGATTTCAGACTTTTCAGAAGAATGGCTTTGAGCAGTTTTATATAAATTATGCCAACGAAAGGATACAACAACATTTTAATCGCCATCTATTTAAACTTGAGCAGGAGGACTATGAATTGGATGGCGTTGATTGGACTAAAGTAGATTTTGAGGACAATCAAGGGTGCTTGGATCTATTTGAGAAGAAACCTGTTGGTCTACTCTCTTTGTTAGATGAGGAGTCAAATTTACCCAAGGCTTCTGATTTAACATTCGCCACCAAACTTAAACATCACCTGGACCCTAATCCTTGCTTCAGAGGGGAAAGAGGCAGAGCTTTCCGTGTTTGTCACTATGCTGGAGAGGTTCTGTATGATACAAATGACTTTCTAGAAAAGAACAGAGACACGATGTCTTCTGATTCCATTCAATTCCTGTCTTCATGTAATTGTGAACTGCTGCAGTTGTTCTCCAAAATGTTTAACCAGTCTCAACAGCAGAGTGTTGCAACAAAGTTCAAGGTTCAATTGTTCAAGTTGATACATCAGTTGGAGGGCACCACGCCTCACTTCATTCGCTGCATAATGCCAAATACTAAGCACCTTCCTGGCATTTATGATGAAGGCCTTGTCCTACAACAGCTCAGGTGTTGTGGAGTTCTAGAAGTTGTTAGACTTTCAAGGGCTGGATATCCTACTCGAATGACCCATCAAGAGTTTTCAAGAAGGTATGGGTTTATGCTTTCTGAGGCCAACGAATTGCATGATCCATTGAGCATTTCAGTTGCTGTTTTACAAAAATTTAATATCCCTTCTGAAATGTACCATCTCGGTATCACCAAATTGTATCTTCGAGCAGGGCAGATTGAGGCACTGGAGAATAAGAGAAAACAAATTTTGCAGGGAATACTTTGGATTCAAAAATGTTTTCGTGGATATCAAGCTCTTATTCGTGGAGAAAATACAAGAAGGAAATATGGTGTTATGGTGAAGTCTTCAATAACAATTTATTCTAGAAAACTGGAGGAGATCCATGCAATCATACTATTACAATCTGTAATTCGTGGTTGGCTGGTTAGAAGGGATGCTAGTCTTGTAAATAGGTCAAAGAAATATCCTGAAACTGCTAAACCTCGGCGGAAGTCGTTTATGAAGATAATACCAGAAGTACAGATTGAGGGAATAAAAGAGATCAAGATGTGGCTGGAAAGGTGGATGCAAAAGCAAGACATCATGTTGGAGGATAGGATCACAAATAAGGAAAGCATTCAAGGGGATATCGATCCCCGTTCAACCAAGCATCAGGATTTGTCCAAAGAGCCACTTCAGAATCTGCTTTCAGCTTTAGCCGAACTCCAAAGGCAGGTTGACAAGGCTGATGCTATTGTAGAGCAAAAGGAAGAGGAATATACTGAATTAAGGGAACAGCTAAAACAATCTGAGAGAAAGAGGATTGAGTATGAGAAAAAAATGAAAACAATGGAGGAGGCTTGGCAAAAACAGATGGCATCTTTGCAAACGAGTCTTGTTGCTGCTAGAAAAAGCCTTGCTCCTGAGAATGCTACTGTTCAACCTGTCAGACATGATTTTGTGTTGCCTCATGGTTATGATTCTGAAGATGCTACGTCCATGGGATCTCGAACTCCTGGTGGAAGCACACCAATGCTCTCTGGTAGTCTCTGTGATGCAGGGAGACAGGCCAATGGCACTTTGACTACAGTGAGCAATCTGATGAAGGAATTCGAGCAGCGAACACAGAACTTTGATGAGGAAGTAAAATCTTTGTACGGTGTTAAACCGGTGCAGTCTGCGAACAGAAGTTCTGTAGAAGAACTTAGGAAACTTAAACAGAGATTTGAGGGATGGAAGAAACAATACAAGGTTAGGTTACGTGAGGCTAAGGCAAGGATTTATAAGGCAGAATCAGAGAACGGTAGGCGAACATGGTGGGGGAAGTTAAGCTTGAGAGCATAA 3558 0.4202 MVLSASPCSLARSSLEEMLDSLRRRDEEEEKKKDLPPALPARPTSRARLPPARRSLPNNFKVGGNERLVVPENGLVTSEESVVKERDLGQKRRRCGFGSKRVKKDVESPYVALSSSDSSGNVWELESDDCISYFIKKKLRVWCRQPRGQWELGVIQSASGEEASVSLTNGNVMTVDRSEILPANPDVLEGVDDLVKLGYLNEPSVLHNLKLRYSQGMIYSKAGPILIALNPFKDLQMYGNDYVSACRQRSVDSPHVCAVADAAYNKMMRDEVNQSIIISGESGSGKTETAKIALQYLAALGGGGNCAIENEFLQINRILEAFGNAKTSRNNNSSRFGKLIEIHFGCMGKICGAKIQTLLLEKSRVVQVASEKLNLRAVNEYKYLVQSDCMSIDGVDDSKNFHQLMEALDAVRICKEERELIFKLLAAILWLGNISFQVGRGDHIEVVDDEAVTSAAQLMGCSTQELVTALCSNKIQADEDTITKNLTLRQAIERRDAIATFVYANLFDWLLDQVNNSLEMGKKCTGKSISILDLYGFQTFQKNGFEQFYINYANERIQQHFNRHLFKLEQEDYELDGVDWTKVDFEDNQGCLDLFEKKPVGLLSLLDEESNLPKASDLTFATKLKHHLDPNPCFRGERGRAFRVCHYAGEVLYDTNDFLEKNRDTMSSDSIQFLSSCNCELLQLFSKMFNQSQQQSVATKFKVQLFKLIHQLEGTTPHFIRCIMPNTKHLPGIYDEGLVLQQLRCCGVLEVVRLSRAGYPTRMTHQEFSRRYGFMLSEANELHDPLSISVAVLQKFNIPSEMYHLGITKLYLRAGQIEALENKRKQILQGILWIQKCFRGYQALIRGENTRRKYGVMVKSSITIYSRKLEEIHAIILLQSVIRGWLVRRDASLVNRSKKYPETAKPRRKSFMKIIPEVQIEGIKEIKMWLERWMQKQDIMLEDRITNKESIQGDIDPRSTKHQDLSKEPLQNLLSALAELQRQVDKADAIVEQKEEEYTELREQLKQSERKRIEYEKKMKTMEEAWQKQMASLQTSLVAARKSLAPENATVQPVRHDFVLPHGYDSEDATSMGSRTPGGSTPMLSGSLCDAGRQANGTLTTVSNLMKEFEQRTQNFDEEVKSLYGVKPVQSANRSSVEELRKLKQRFEGWKKQYKVRLREAKARIYKAESENGRRTWWGKLSLRA 1185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00667 1185 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 891 IPR027417 -
Spst11g00667 1185 PRINTS Myosin heavy chain signature 528 556 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst11g00667 1185 PRINTS Myosin heavy chain signature 273 298 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst11g00667 1185 PRINTS Myosin heavy chain signature 317 344 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst11g00667 1185 PRINTS Myosin heavy chain signature 581 609 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst11g00667 1185 PRINTS Myosin heavy chain signature 219 238 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst11g00667 1185 MobiDBLite consensus disorder prediction 21 37 - -
Spst11g00667 1185 Gene3D - 830 899 - -
Spst11g00667 1185 Gene3D Myosin VI head, motor domain, U50 subdomain 414 693 - -
Spst11g00667 1185 Gene3D Kinesin motor domain 521 753 IPR036961 -
Spst11g00667 1185 Coils Coil 1151 1171 - -
Spst11g00667 1185 MobiDBLite consensus disorder prediction 21 57 - -
Spst11g00667 1185 Pfam IQ calmodulin-binding motif 873 889 IPR000048 GO:0005515
Spst11g00667 1185 Gene3D Kinesin motor domain 192 370 IPR036961 -
Spst11g00667 1185 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 136 185 IPR004009 GO:0003774|GO:0005524|GO:0016459
Spst11g00667 1185 Pfam Myosin head (motor domain) 191 813 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst11g00667 1185 Gene3D - 371 412 - -
Spst11g00667 1185 SMART MYSc_2a 183 826 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst11g00667 1185 Coils Coil 12 32 - -
Spst11g00667 1185 PANTHER MYOSIN 182 1167 - -
Spst11g00667 1185 ProSiteProfiles Myosin motor domain profile. 189 825 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst11g00667 1185 CDD MYSc_Myo8 203 813 IPR036022 -
Spst11g00667 1185 ProSiteProfiles IQ motif profile. 871 899 IPR000048 GO:0005515
Spst11g00667 1185 SMART iq_5 870 892 IPR000048 GO:0005515
Spst11g00667 1185 SMART iq_5 826 855 IPR000048 GO:0005515
Spst11g00667 1185 Gene3D - 758 826 - -
Spst11g00667 1185 Coils Coil 970 1025 - -
Spst11g00667 1185 Gene3D - 538 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00667 Spst-Chr11 28853440 28864974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00667 1 1180 Myosins gene family AT5G54280 53.616 0.0 1290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00667 K10357 - gmx:100802074 1788.85