Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00639 ATGCAGTTCCATGATGTGATCTATAAAATTAAGATTAGAAAGTGGGGATCTCTGAAGAACACTACGGTAGAAGATAAAGTAATACTGAATGGAGTGACAGGCATGGTTCAACCTGGTGAAATTCTTGCCATGTTAGGTCCTTCTGGGAGTGGCAAAACAACTTTGCTAGCAGCATTGGGAGGCAAGCTTGGAGGCAAACTCAATGGAAGCATAACATACAATGGCAAAGCCTTCTCAAATGCAATGAAGAGAAACACAGGTTTTGTGATACAAGATGATATTTTCTATCCCCACTTGACTGTGACTGAAACTCTAGTGTTCACGGCCCTTCTCAGATTGCCAAAATGTTTCTCCATAAAGGAGAAAATTGTTCATGCAAAAGCTGTGATGGCTCAACTTGGTTTAACCAAGTGCAAGGACAGCATCATTGGAGGCCCATTGTTGAGAGGGGTTTCTGGGGGGGAAAGAAAAAGGGTTAGCATTGGACAAGAATTGCTCATAAACCCAAGCTTGTTGTTCCTGGATGAGCCAACCTCTGGCCTAGACTCAACAACAGCTCAAAGAATTGTCTCAACTTTGTGGGAGCTAGCAAATGGAGGCAGAACTGTTGTGATGACCATACATCAACCTTCAAGTAGGATTTACTACATGTTTCACAGAGTGTTACTGCTTTCAGAAGGGAACCTGCTATATTATGGAAAAGGATCTGAAGCTATAGAATATTTTACTAATATTGGATGTGCCCCTACCATGGCCATGAACCCCTCAGATTTTCTTTTGGATCTTGCTAATGGTGTCTACACTGATCAATCGAATGAGGACCGTGCCTTGAATAAAAATAAATTGATTTCTGCATATAGGAACTACTATGATGCCAAATGGAAGCCAGAAATTCAACAAATTCCTGACTATGATAAAAGTCAGGGTAGAATTGAAGACATTGGCTTTGGGGAATGGCCTACCAGTTGGTCACAGCAATTTCTTGTACTGCTAAAAAGAGATGTCAAAGAGAGAAAATATGCATCATTCTCTGGCCTCAGGGTTTGTCAGGTCCTTGTGGTTGCTCTTATTACAGGATTAGTATGGTATAAGTCTGATATTTCACACTTGCAGGATCAGATTGGGATTCTATTCTTCCTTACAAGCTTCTGGGGTAGCATGCCTCTCTACCAAGCAATATTCACTTTCCCCCAAGAGCTAATGATGCTGGAGAAGGAACGATCCTCTGGAATGTACAAACTATCTTCATACTTCATGTCAAGGATGGTTGGTGACCTTCCGATGGAGCTTGTGCTTCCCACCATATTCGTCACCATAGTCTATTGGATGACAGGGTTGAAAAGCAATGTGGTACACTTCTTGTACACCCTTCTCACTATCTTACTCGATGTGTTAGTTTCACAAGGGCTAGGCCTTGCCATTGGAGCTATTGTAATGGACCAGAAATCCGCAACCACAGTGGCCGCAGTCATTGTGCTAACTTCTGTTCTAGTTAGTGGATACTATATTCAACATGTGCCAAAATTTGTAGCATGGTTCAAGTATTTCTCCATCAACTACTATATATACCATCTCTTGATGGGGTCTCACTATGAGTCAAGTGACACATACCCTTGTTCTGATGGACAGTGTTTGGTTGCAGAATATCCTTTGATTGAGCAAATGGGGCTACATTTGAAAGGGAAAGTCATGTCTGCATTGGCTCTATTCATAATGCTGATAGGCTACAGACTTGTGGCTTATTTTGCTCTGATGAGAATTGGGATGACAAAGAAATTGGGGTAG 1785 0.4174 MQFHDVIYKIKIRKWGSLKNTTVEDKVILNGVTGMVQPGEILAMLGPSGSGKTTLLAALGGKLGGKLNGSITYNGKAFSNAMKRNTGFVIQDDIFYPHLTVTETLVFTALLRLPKCFSIKEKIVHAKAVMAQLGLTKCKDSIIGGPLLRGVSGGERKRVSIGQELLINPSLLFLDEPTSGLDSTTAQRIVSTLWELANGGRTVVMTIHQPSSRIYYMFHRVLLLSEGNLLYYGKGSEAIEYFTNIGCAPTMAMNPSDFLLDLANGVYTDQSNEDRALNKNKLISAYRNYYDAKWKPEIQQIPDYDKSQGRIEDIGFGEWPTSWSQQFLVLLKRDVKERKYASFSGLRVCQVLVVALITGLVWYKSDISHLQDQIGILFFLTSFWGSMPLYQAIFTFPQELMMLEKERSSGMYKLSSYFMSRMVGDLPMELVLPTIFVTIVYWMTGLKSNVVHFLYTLLTILLDVLVSQGLGLAIGAIVMDQKSATTVAAVIVLTSVLVSGYYIQHVPKFVAWFKYFSINYYIYHLLMGSHYESSDTYPCSDGQCLVAEYPLIEQMGLHLKGKVMSALALFIMLIGYRLVAYFALMRIGMTKKLG 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00639 594 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 580 - -
Spst11g00639 594 Pfam ABC-2 type transporter 208 279 IPR043926 GO:0140359
Spst11g00639 594 Pfam ABC-2 type transporter 325 528 IPR013525 GO:0016020|GO:0140359
Spst11g00639 594 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 243 IPR027417 -
Spst11g00639 594 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 251 IPR003439 GO:0005524
Spst11g00639 594 SMART AAA_5 38 228 IPR003593 GO:0016887
Spst11g00639 594 FunFam ABC transporter G family member 22 17 245 - -
Spst11g00639 594 ProSitePatterns ABC transporters family signature. 151 165 IPR017871 GO:0005524|GO:0016887
Spst11g00639 594 Pfam ABC transporter 29 179 IPR003439 GO:0005524
Spst11g00639 594 Gene3D - 18 245 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00639 Spst-Chr11 28551322 28554152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00639 25 236 Calmodulin-binding Proteins AT2G36910 24.312 3.54e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00639 K05681 - gmx:100812397 966.066