Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00606 ATGGACCTTCATAAACCTCTGTGCCTCTTCTTGTTTCTCCTCACTCTTCTCTCAAGCTCCCAAGCCCGCAAATTCAACGTTGGTGGAAGCCAAGGGTGGGTTCCAAACCCTTCCGAGGGTTACAACAATTGGGCTGGAAGAAACCGATTCCAAATCAATGACACAATAGTTTTCAAGTACCAGAAGGGTTCGGACTCGGTGTTGGAAGTGAAGAAGGAAGATTATGACAAGTGCAACATGACCAACCCAATCAAGAAGTTTGAAGACGGTGACACTGAGTTCAAGTTTGATCGATCAGGACCATTCTACTTCATAAGTGGAACAGATGGAAATTGTGAAAAGGGTCAGAAATTAATTGTTGTCGTTTTGTCCCCAAGAACACCACCTCAACCGCTACCACCGTCTTCACCGCCAAACCTTTCACCGCTACCACCGTCACCAAAACTTTCACCGTCTTCACCATCGGTACCACCGAAACCTTCCCTTTCACCTTCATTATCACCATTACCATCACCATCGCTACCACCAATATCTTCACCTTCACCGTCAACAAAGCCTAACCCACCAACCGTGTCACCATCCATCCCACCGTTTCCGGTGGTTCAACCTCCTTTAAGCTCTCCAACTCCAGCAAACGCTCCGACATCGGTGACACTACCTCCGATAGCGTCCCCAGCTTACTCTCCTCCGGCACCATCGCCGCCACAGTCAGCGCCGTCGTCATCGCCGCCGCAGTCAGCGCCGTCGTCATCGCCGCCGCAGTCAGCGCCGTCTAATTCAACGGCACCGTCATCGAATAATGGTGGATTTTCTGCGGCTCCTTCGAACGCTTTGGTGTATTCCGTTACAATTCTCGTTGGTACTGCGTTGTTCCGTCACTGA 882 0.5045 MDLHKPLCLFLFLLTLLSSSQARKFNVGGSQGWVPNPSEGYNNWAGRNRFQINDTIVFKYQKGSDSVLEVKKEDYDKCNMTNPIKKFEDGDTEFKFDRSGPFYFISGTDGNCEKGQKLIVVVLSPRTPPQPLPPSSPPNLSPLPPSPKLSPSSPSVPPKPSLSPSLSPLPSPSLPPISSPSPSTKPNPPTVSPSIPPFPVVQPPLSSPTPANAPTSVTLPPIASPAYSPPAPSPPQSAPSSSPPQSAPSSSPPQSAPSNSTAPSSNNGGFSAAPSNALVYSVTILVGTALFRH 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00606 293 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
Spst11g00606 293 MobiDBLite consensus disorder prediction 252 273 - -
Spst11g00606 293 CDD OsENODL1_like 23 123 IPR041846 -
Spst11g00606 293 MobiDBLite consensus disorder prediction 126 210 - -
Spst11g00606 293 FunFam Early nodulin-like protein 1 22 127 - -
Spst11g00606 293 Pfam Plastocyanin-like domain 33 116 IPR003245 GO:0009055
Spst11g00606 293 SUPERFAMILY Cupredoxins 22 123 IPR008972 -
Spst11g00606 293 PANTHER BLUE COPPER PROTEIN 24 191 IPR039391 GO:0009055
Spst11g00606 293 MobiDBLite consensus disorder prediction 223 251 - -
Spst11g00606 293 Gene3D - 21 126 IPR008972 -
Spst11g00606 293 MobiDBLite consensus disorder prediction 125 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00606 Spst-Chr11 28216838 28217880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00606 7 267 Phytocyanin Superfamily AT4G27520 43.123 4.97e-55 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00606 - - gmx:100795901 218.394