Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00598 ATGGTGGGCTCAGGAACAACAACAGATAGGAGCAAAGAAGCTGTTGGGATGATGGCCCTTCACGAGGCCCTCAGAAGTGTGTGTCTCAACTCGGATTGGACTTACTCTGTCTTCTGGACCATTCGTCCTCGACCAAGAGTGAGAGGTGGCAATGGGTGCAAGGTTGGGGATGACAACGGCAGCTTGATGTTGATGTGGGAAGATGGATTTTGCCGGGGAAGGGTTTCGGATTGTTTGGAAGAGATTGAAGGAGAGGATCCTATCAGAAAATCTTTCAGCAAAATGTCCATTCAGTTATATAATTATGGAGAAGGGTTGATGGGAAAGGTTACATCTGATAAGTGCCACAAATGGGTCTTCAAAGAGCCTACGGAATGTGAGCCTAATATATCCAACTACTGGCAGAGCTCCTTTGATGCTCTTCCCCCTGAATGGATAGAGCAGTTTGAGTCAGGTATTCAGACAATAGCTGTGATTCAAGCTGGGCATGGCCTTCTGCAACTTGGTTCTTGCAAGATTATTCCTGAAGACCTCCATTTTGTGCTAAGAATGAGACACACTTTCGAATCTCTAGGCTACCAATCAGGGTTCTACCTCTCCCAACTCTTCTCTTCAACTAGGAGCACTTCCTCTTCTACTTCCCTTCCTTCAAAACCATCCACCATTCCAATTAGGCCACCCCCTCCACTCCTCAACTGGGGTCAGAGACCAATGGGGTCTGCTACTTCTTTGCTACCCTCTCCTACTTTTCAACATGCAGCCAGAATGGGGTTCCCACAGGCCAAAGATGAGACGCATATGTTCCTCATGCCCCATGCATCATCAGAGCATGCAAGAGTGGGAGACATCATGGGGGAGCATGAGAATGACATAAAGTGGCCAAATGGGTTATCCATCTTCAATGCACTCACCGGAAGATCTGATGATGCTAAACTCTTGTTCAATCAAGAGAGCTTGGGGAGCAAACCAGGTGATCACAATCCCCACCACCACTCTCTCAACCCAAATCCCACCTCAGCTTTGCAAAATGCTAGTGTGGCAAACCCAAACGAGTTCTTGAGCTTGGATGGCCACACTGAAGGGGCAAGGAAAGTGGACAAGTTCAAGAGGTGTTTCACTCTACCTGCCAGAGTGGTTTCATCTTCATCTTCTACTTCAATGGATCATCACCATCACCAGCAAGCAGGTGTGGAGTATAGGAATTCAGAAGGAGGTATGTACCAGGATGTCATGGAGACCTTTTTGGAGTGA 1251 0.4748 MVGSGTTTDRSKEAVGMMALHEALRSVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRVSDCLEEIEGEDPIRKSFSKMSIQLYNYGEGLMGKVTSDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWIEQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRSTSSSTSLPSKPSTIPIRPPPPLLNWGQRPMGSATSLLPSPTFQHAARMGFPQAKDETHMFLMPHASSEHARVGDIMGEHENDIKWPNGLSIFNALTGRSDDAKLLFNQESLGSKPGDHNPHHHSLNPNPTSALQNASVANPNEFLSLDGHTEGARKVDKFKRCFTLPARVVSSSSSTSMDHHHHQQAGVEYRNSEGGMYQDVMETFLE 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00598 416 MobiDBLite consensus disorder prediction 208 229 - -
Spst11g00598 416 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 20 188 IPR025610 -
Spst11g00598 416 PANTHER GB|AAF34833.1 1 416 IPR044170 -
Spst11g00598 416 MobiDBLite consensus disorder prediction 317 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00598 Spst-Chr11 28002351 28005196 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00598 21 191 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 32.370 6.61e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00598 - - gmx:100789006 748.429