Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00595 ATGACGGGCAAAGAAATTTTTCATAAGATGAAGGAAAAAGTTTTGGGCTCATCTGATCCTGATTCGGGTAAAGGAAAGAGCAAGATGAAGAAGCACATAACTCATGGCTTTCACTTAGTGAAGGGAAGATCAGGCCATGCCATGGAAGACTATGTTGTTGCTCAGTTTAAGCAAGTTGATAACAATGAATTGGGCTTATTTGCGATATTTGATGGCCACTCAGGTCACAGTGTACCTGATTACTTGAAAACTCATTTGTTTGATAACATCTTGAAAGAGCCTAACTTCTGGACAGAACCTGCTGATGCTGTCAAGAGAGCGTATAGTATAACTGATTCAACTATTTTAGACAAATCAGGTGAATTGGGCAGAGGGGGTTCAACTGCAGTTACAGCAATATTGATCAACTGTCAGAAGTTAGTGGTGGCCAATATTGGGGATTCCCGGGCTGTTTTGTGCAAGAATGGCGAGGCCAAACAACTATCAGTTGATCATGAACCAAGCATAGAGAGTGAGGATATAAAAAACAGAGGTGGTTTTGTGTCAAACTTCCCAGGGGACGTTCCACGAGTTGATGGTCAGTTGGCAGTGTCAAGGGCATTCGGTGACAAAAGCCTGAAGATTCACTTGAGCTCAGAACCACATGTGATTGTGGAACTGATAGATGATGATGCAGAGTTCGTTATTTTAGCTAGTGATGGTTTATGGAAGGTAATGACAAATCAAGAAGCAGTTGAAGCAATCAGAGATGTTAAGGATGCTCGGTCTGCTGCAAGGATCCTAACTGAAGAAGCACGTAACAGGAAAAGCTCAGATGATATCTCTTGCGTTGTTGTGAAATTTCAGTGA 849 0.4193 MTGKEIFHKMKEKVLGSSDPDSGKGKSKMKKHITHGFHLVKGRSGHAMEDYVVAQFKQVDNNELGLFAIFDGHSGHSVPDYLKTHLFDNILKEPNFWTEPADAVKRAYSITDSTILDKSGELGRGGSTAVTAILINCQKLVVANIGDSRAVLCKNGEAKQLSVDHEPSIESEDIKNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKIHLSSEPHVIVELIDDDAEFVILASDGLWKVMTNQEAVEAIRDVKDARSAARILTEEARNRKSSDDISCVVVKFQ 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00595 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Spst11g00595 282 PANTHER PROTEIN PHOSPHATASE 27 281 IPR015655 GO:0004722|GO:0006470
Spst11g00595 282 CDD PP2Cc 35 281 IPR001932 -
Spst11g00595 282 SMART PP2C_4 24 279 IPR001932 -
Spst11g00595 282 SUPERFAMILY PP2C-like 29 281 IPR036457 -
Spst11g00595 282 Gene3D - 16 282 IPR036457 -
Spst11g00595 282 Pfam Protein phosphatase 2C 47 274 IPR001932 -
Spst11g00595 282 FunFam Probable protein phosphatase 2C 39 24 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00595 Spst-Chr11 27986180 27990438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00595 1 282 PP2C-type Phosphatase Gene Family AT3G15260 75.433 6.24e-163 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00595 K17506 - gmx:100787942 517.309