Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00585 ATGGCTCCGAAAGACAACAGATCCAACGTTCTATCGCCCTCCGACCCGACCCGTTTGGACAAAGAGATCCGATACCGCGGGGTCAGGAAGAGACCCTGGGGCCGCTACGCCGCCGAGATCCGCGACCCGGGGAAGAAAACGCGCGTCTGGCTCGGCACCTTCGACACCGCAGAGGAGGCCGCGCGTGCGTACGACGCTGCAGCGCGTGAGTTCCGCGGCGCGAAGGCCAAGACCAATTTCCCCACGCACGCGGAACTCTCCCACGTGGCGCGTAGCCCCAGCCAGAGCAGCACCCTCGAGTCCCCCTCTCCGCCGCCGCCGCCGCCGCTCGACCTCACTCTCAACCCACTCGCCGCCGCCGGCTCGTTGGTGTTCCCTGTCTCCCGCCCCGTGGTTTTCTTTGACGCGTTCGCCCGTGCTGAGGTGCGCGCTTTCGATCTTCCCGTGACCGCGTTTCGCCGCGCCGCCGTCACCGCCCAGAGCGACTCCGACTCGTCTTCTGTCGTTGACTACGAGCGGGTCCCACATCAAAGAGTGGTGTTGGATCTCGACCTTAATGTCCCTCCTCCGCCCGAGGTTGCCTGA 585 0.6598 MAPKDNRSNVLSPSDPTRLDKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDAAAREFRGAKAKTNFPTHAELSHVARSPSQSSTLESPSPPPPPPLDLTLNPLAAAGSLVFPVSRPVVFFDAFARAEVRAFDLPVTAFRRAAVTAQSDSDSSSVVDYERVPHQRVVLDLDLNVPPPPEVA 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00585 194 MobiDBLite consensus disorder prediction 82 111 - -
Spst11g00585 194 MobiDBLite consensus disorder prediction 1 21 - -
Spst11g00585 194 Pfam AP2 domain 24 73 IPR001471 GO:0003700|GO:0006355
Spst11g00585 194 SUPERFAMILY DNA-binding domain 24 82 IPR016177 GO:0003677
Spst11g00585 194 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
Spst11g00585 194 FunFam Ethylene-responsive transcription factor 2 24 82 - -
Spst11g00585 194 CDD AP2 24 83 IPR001471 GO:0003700|GO:0006355
Spst11g00585 194 Gene3D AP2/ERF domain 23 83 IPR036955 GO:0003700|GO:0006355
Spst11g00585 194 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 13 169 - -
Spst11g00585 194 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Spst11g00585 194 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Spst11g00585 194 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00585 Spst-Chr11 27908437 27909021 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00585 21 153 AP2-EREBP Transcription Factor Family AT3G15210 63.158 8.31e-53 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Spst11g00585 AP2 1.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00585 K09286 - gmx:100785455 237.269