Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00581 ATGGAAAGTGGGGCTGTGGCTATGAACAACAACAGCACCACCATCAGCAACCACAATGAAGCCAGAGCAACTTCCACCATCACCATTAAGGGCATTCTCAGTCTTCTAAAGGAAAACATTGATGGGAATTTGGATGGTGGAAGCAAGAGAGTTATTTCTCTGGGCATGGGTGACCCAACTCTCACCACATTATTTCACACTCCTAAGGTTGTTGAAGATGCTGTTGCTGACACTCTTCACTCTCACAAGTTTCATGGCTATGCTCCCACTGCTGGGCTTCCCCAGGCTAGAAAAGCGATTGCTGAATATCTATCTCGTGACCTTCCTTACCAATTATCAAGTGATGATGTTTTCATCACTTCTGGATGCACACAAGCCATTGATGTTTCAGTGGCCATGCTTGCTCGCCCCGGTGCAAACATCTTGATTCCAAGACCAGGCTTCCCAATCTATGAACTTAGTGCTGCATTTAGAGGGGTTGAAGTGAGGCATTACGATCTGCTTCCAGAGAAAGGTTGGGAGGTTGATCTAGATGGTGTTGAAGCTCGTGCTGATCAGAACACTGTTGCCTTGGTGATCATAAATCCTGGGAATCCTTGTGGGAATGTGTACAGTTACCATCATTTGGAAAAGATAGCTGAAACTGCAAAACGGGTTGGAACAATTGTGATTTCTGATGAAGTTTATGGTCACCTTGCATTTGGGGGCAAGCCTTTTGTGCCAATGGGAGTTTTTGGCTCAATTATTCCTGTTCTCACTCTTGGCTCACTGTCTAAGAGATGGATAGTTCCTGGATGGAGACTTGGTTGGTTTGTGACAAATGATCCGTCTGGCACTTTTAGAGAACCAAAGGTAGTTGAGCGCATTAAAAAGTATTTTGATCTTTTGGGAGGTCCAACCACCTTCATCCAGGCAGCTGTACCTCAGATAATTGCAAATACTGAAGAGATTTTCTTCAATAAAACCATTGACAATTTGAGGCATACTGCAGATATATGTTGCACAGAGATAAAGGATATTCCAGGCATTTTTTGCCCTTACAAACCAGAAGGGTCCATGGCTATGATGGTGAAACTAAACCTTTCACTTCTAGAAGATATTAGTGATGATATAGACTTCTGTTTCAAACTTGCAAAGGAGGAGTCTGTAATCATTCTTCCAGGAACTGCAGTAGGGCTAAAAGATTGGCTTCGTATAACCTTCGCTGCTGATCCATCTGCTCTTAGAGAGGTGGTTCAGGACATCTCTTTCAAGGAGGCAGAGAGGCAGGGGATTCGACTTCCTTTAGAGCACCACCACCCTCACCTCGACAACAACAATGAGCCACATTTACCTCCGGGCTTCCGTTTCCACCCCACAGACGAAGAACTCATCACATACTACCTCCTCAAGAAGGTTCTTGACAGCTCCTTCACTGGCCGAGCCATAGTTGAAGTCGACCTCAACAAGTGCGAGCCATGGGAGCTTCCTGAGAAAGCAAAGATGGGTGAGAAGGAATGGTACTTCTATAGCCTTCGCGACCGAAAGTACCCAACTGGGTTACGCACCAATAGGGCCACAGAGGCTGGTTATTGGAAAGCCACAGGGAAAGACCGAGAGATATATAGCTCCAAAACCTGTTCCCTCGTAGGAATGAAGAAAACCCTGGTTTTCTATAGAGGAAGGGCTCCAAAGGGTGAAAAGAGCAACTGGGTCATGCATGAGTATCGCTTAGAAGGCAAATTCGCTTACCACTACCTCTCTAGAAGCTCCAAGGATGAGTGGGTGATATCGCGCGTGTTTCAGAAGAACAACACCGGCGGTGGCTCTACCGTGTCAGCCGCCGCCACCGGCGGGGCAAAGAAAACAAGAATGAGCACATCAAACACAAGCAGCAACATGAGCCTGTGCCCCGAACCGGGTTCACCCTCTTCCATTTACCTCCCACCGCTTCTAGAATCTTCTCCTTACGCCGTCAGTAGCAGCGCCGCCGCTGCAACATTCAACGACCGTGAAAGCTGCTCCTTCGACAGCGCTGCCGCCGCCGCCAATCAAAGGGAGCACGTGTCCTGTTTCTCCACCATGTCCGCCGACGCTGCCGCCTTCAACAACCTCGTTCCACCGCCAGAGCCGCCCCTCGACCCTTTCTCCCGCTTTCATAGGAGCAACGTTGGAGTCTCCGCCTTCCCATGCCTGAGGTCCTTGCATGACAACCTTAACCTCCCCTTCTTTTTCCCGCCCGTGGTTCACGGCGGTGCTGACGTATCAAATTTCACGGCCGTCGCAAACTGGCCGGCGCCAGAGGATCCGAGGGTGGCTGACGGCGGTTCCGGCATGCCGATTGTACCGTCCGAGTTGGATTGCATGTGGGGCTATTGA 2358 0.4907 MESGAVAMNNNSTTISNHNEARATSTITIKGILSLLKENIDGNLDGGSKRVISLGMGDPTLTTLFHTPKVVEDAVADTLHSHKFHGYAPTAGLPQARKAIAEYLSRDLPYQLSSDDVFITSGCTQAIDVSVAMLARPGANILIPRPGFPIYELSAAFRGVEVRHYDLLPEKGWEVDLDGVEARADQNTVALVIINPGNPCGNVYSYHHLEKIAETAKRVGTIVISDEVYGHLAFGGKPFVPMGVFGSIIPVLTLGSLSKRWIVPGWRLGWFVTNDPSGTFREPKVVERIKKYFDLLGGPTTFIQAAVPQIIANTEEIFFNKTIDNLRHTADICCTEIKDIPGIFCPYKPEGSMAMMVKLNLSLLEDISDDIDFCFKLAKEESVIILPGTAVGLKDWLRITFAADPSALREVVQDISFKEAERQGIRLPLEHHHPHLDNNNEPHLPPGFRFHPTDEELITYYLLKKVLDSSFTGRAIVEVDLNKCEPWELPEKAKMGEKEWYFYSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSRSSKDEWVISRVFQKNNTGGGSTVSAAATGGAKKTRMSTSNTSSNMSLCPEPGSPSSIYLPPLLESSPYAVSSSAAAATFNDRESCSFDSAAAAANQREHVSCFSTMSADAAAFNNLVPPPEPPLDPFSRFHRSNVGVSAFPCLRSLHDNLNLPFFFPPVVHGGADVSNFTAVANWPAPEDPRVADGGSGMPIVPSELDCMWGY 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00581 785 Gene3D NAC domain 453 600 IPR036093 GO:0003677|GO:0006355
Spst11g00581 785 NCBIfam tyrosine/nicotianamine family aminotransferase 17 415 IPR005958 GO:0006520|GO:0008483|GO:0030170
Spst11g00581 785 Gene3D Aspartate Aminotransferase, domain 1 53 415 IPR015422 GO:0003824
Spst11g00581 785 CDD AAT_like 52 415 - -
Spst11g00581 785 SUPERFAMILY PLP-dependent transferases 47 415 IPR015424 -
Spst11g00581 785 Pfam Aminotransferase class I and II 50 414 IPR004839 GO:0009058|GO:0030170
Spst11g00581 785 ProSiteProfiles NAC domain profile. 444 596 IPR003441 GO:0003677|GO:0006355
Spst11g00581 785 FunFam tyrosine aminotransferase 70 315 - -
Spst11g00581 785 MobiDBLite consensus disorder prediction 601 631 - -
Spst11g00581 785 Gene3D - 70 315 IPR015421 GO:0003824
Spst11g00581 785 PANTHER TYROSINE AMINOTRANSFERASE 14 416 - -
Spst11g00581 785 Pfam No apical meristem (NAM) protein 445 571 IPR003441 GO:0003677|GO:0006355
Spst11g00581 785 SUPERFAMILY NAC domain 440 596 IPR036093 GO:0003677|GO:0006355
Spst11g00581 785 FunFam NAC domain-containing protein 100-like 453 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00581 Spst-Chr11 27857840 27872613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00581 431 785 NAC Transcription Factor Family AT5G53950 50.789 9.43e-111 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Spst11g00581 Aminotran_1_2 2.9e-57 CL0061
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00581 K00815 - gmx:732650 724.546