Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00571 ATGGTGCTTGTCTTTTGGGTTGAAGTCAATCTTCAATTAGAAGTAATAATCATAAATTTCACTCAATCTCTGGCTACAACAGATCCTTCTCAAGTGACAGCTTTGAATGCAATTTTCCAGAAATGGAAAATATCTGCACCACCTCAATGGAATATAAGTGGTGAACCATGTAGTGGAGTGGCCATTGACGACACTTCATTAGATGATTTTGAGATGATGATCAAGAAACTTCGTGCAAAGGATGTTCTTGGTGAGATCCCAGAAGAGCTTTGGACTTTGACATACCTCTTCAACTTGGGATTAGCAGCTAACTCTTTGTCTGGAGGGATTCCAAAGGAATTAGGACATCTCACTGATTTAAGTTCGTTGTCTTTAATGGAAAACAACTTCTCTGGATCACTTCCACCTGAGTTAGGGAGTCTGGTGAAATTAGAACAACTCTCTGGGATTAGTGGTGAGATTCCTATGACTTTTGCTAATCTTGGAAACCTCAGGATAGTGTGGGCGACAGATATCCAACTCAAAGGCAAGATACCCGATTTTATAGGGAATTGGTCCAAGCTTCATACCCTCAATTTAGTTGGCAACAACTTCGAAGCAGAGAATACAGAAAGCAGTGGTATGCCTTCAGGATTAAGATGCCTTCAACGTAACTTTCCTTGTAATCATGGCACTGGAATCTATTACAACTTTTCAATCAATTGTGGTGGTCATGAAATTGTATCTTCCAAGGGAGTTGTGTATGAAAATGATGTTGAGGAACTTGGTCCAGCTACATACTTTGTGACAAACACTCAAAGGTGGGGGCATGTAGCAGCACAAGTACACTACAATGTCTATGCAGAGGATTATTCTGGTAGCGACCCAGTAGCGTTGGTAGCTAATCATTTGGGTAATTGTGTTACTGTGCAGGAACTGAATCAAGTGCTAGAGGCTCCACTCAATGCACTTCGCATCCACATTTTAATGTTGCGGAATGGGGTTTTGCCCGATTGTTATACCCTTCCCATTGTTCTCAAGGCTGTGTGCCAAACTTTTGAAGTTAAGCTCGGGAAACAGGTTCACTCCGTTGCTGGCGAATTTGGAAGTGCCCGAAGGGTGTTTGATGAAAACCCTGACCCGAAGCTGGGTTCTTGGAATGCGGTAATTGGTGGGCTTTCCCAATGTGGTCTTGCCCGGGATGCGATCAACGTGTTCCTTGATATGAGGAGGCGGGGATTTGAGCTGGATAGGTTGACCATGATTAGTGTGACTTCGGCTTGTGGAAAGATTGGTGACCTCAACCTGGCTCTCGAGTTGCATAAATGTGTTTTTCAGGTTGAATCTGATCCCAACATGTTCCAAACTGCACGACTATCTGCCTCATCGTTAAGATATTATGGCTTGGGACTGGAAAATGGTAACTACAATGTGAGTCTCCAGTTTGCTGAAAGCAAAATTTTAGATTTTGCCACATGGAGAAGTGTTGGGAGGCGAGTCTTTGATGTCTACATCCAGGGGAATCTTGTTTTAAAGGATTTTGATATACAAAGGGAAGCTGGTAAGGTGTCTTTCAAAGCCATTGAAATGGAATTTAGAGCTCAATGCTACCCCAGTAACAAGCCTCCCACCATTGAGAAGAAAAGGATTGGCCTGAAAGTTGGAATAGCTCTCGGCATTGGAGTTTTAAGCATTTTTTCTATTTCTGTGGTTTGTTTCATCAGTCGAAGAAGACATCATGTTGATGAAAATGAAGAGTTCTTTGGTATTGAAGCTAGACCATACACTTTCAGTTACTCTGTGTTAAAGAATTCCACCAATAATTTTGATTCTTCCAATAAGCTTGGAGAAGGTGGATTTGGCCCTGTCTATAAGGGGAAACTTAATGATGGGAGATTGATAGCAGTTAAGCAACTCTCTGCACAATCTCGTCAAGGAAACACAGAGTTCATGACTGAGATTGCAACTATTTCTGCAGTGCGACATCGTAACCTCATTAAGTTACATGGATGTTGCAGTCAAAAGGATAAACGACTTTTAGTTTATGAGTATTTAGAAAATGGGAGTCTTAATAAACTACTATTTGGAAAAGCAAGTTCAACCCTGAACTGGGCAATACGATTTGGTATCTGCAAGGGCATTGCACAAGGCTTGACCTATCTCCACGAAGAATCACAATTACGTATAATTCATCGTGACGTGAAGGCTAGTAATATTTTGCTTGACCATCAATTTGTCCCTAAAATATCAGATTTTGGTTTGGCTAAGCTATTTGATCTGGAAAAAACCCACTTAAGCACAAATCTTGCTGGGACAAGGGGGTATTTGGCACCAGAATATGCCTGGCGTGGGCACCTCACAGAAAAAGCAGATGTATTTGCCTTTGGTATCGTAGCTCTAGAGATTGTTAGTGGAAGGTCGAATTCAGATTCTATCATGGAAACTGAAGAAAAAGAGACATTTCTACTAGAATGGGCTTGGAACCTTCACATGAACAAGAATGAAATTGAGTTATTGGATTCAAGGCTAGAAGAGTTTGATGAGGCAGAAGTGAGACGTGTGATTGGGATTTCTTTATTATGCACACAATCATCACCCTTTCTGCGACCATCCATGTCTCGAGTAATGGCAATGCTTTCAGGTGATGTTGAAGTTCCCTGCGTAACATCAATGCCTGGGTACTTGGGGCTTGCTTTTGATGATATAACTGACCAGATAATACAAAAAGTTTAG 2712 0.4145 MVLVFWVEVNLQLEVIIINFTQSLATTDPSQVTALNAIFQKWKISAPPQWNISGEPCSGVAIDDTSLDDFEMMIKKLRAKDVLGEIPEELWTLTYLFNLGLAANSLSGGIPKELGHLTDLSSLSLMENNFSGSLPPELGSLVKLEQLSGISGEIPMTFANLGNLRIVWATDIQLKGKIPDFIGNWSKLHTLNLVGNNFEAENTESSGMPSGLRCLQRNFPCNHGTGIYYNFSINCGGHEIVSSKGVVYENDVEELGPATYFVTNTQRWGHVAAQVHYNVYAEDYSGSDPVALVANHLGNCVTVQELNQVLEAPLNALRIHILMLRNGVLPDCYTLPIVLKAVCQTFEVKLGKQVHSVAGEFGSARRVFDENPDPKLGSWNAVIGGLSQCGLARDAINVFLDMRRRGFELDRLTMISVTSACGKIGDLNLALELHKCVFQVESDPNMFQTARLSASSLRYYGLGLENGNYNVSLQFAESKILDFATWRSVGRRVFDVYIQGNLVLKDFDIQREAGKVSFKAIEMEFRAQCYPSNKPPTIEKKRIGLKVGIALGIGVLSIFSISVVCFISRRRHHVDENEEFFGIEARPYTFSYSVLKNSTNNFDSSNKLGEGGFGPVYKGKLNDGRLIAVKQLSAQSRQGNTEFMTEIATISAVRHRNLIKLHGCCSQKDKRLLVYEYLENGSLNKLLFGKASSTLNWAIRFGICKGIAQGLTYLHEESQLRIIHRDVKASNILLDHQFVPKISDFGLAKLFDLEKTHLSTNLAGTRGYLAPEYAWRGHLTEKADVFAFGIVALEIVSGRSNSDSIMETEEKETFLLEWAWNLHMNKNEIELLDSRLEEFDEAEVRRVIGISLLCTQSSPFLRPSMSRVMAMLSGDVEVPCVTSMPGYLGLAFDDITDQIIQKV 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00571 903 FunFam Putative LRR receptor-like serine/threonine-protein kinase 678 884 - -
Spst11g00571 903 ProSiteProfiles Protein kinase domain profile. 602 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00571 903 Pfam PPR repeat 378 407 IPR002885 -
Spst11g00571 903 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 375 409 IPR002885 -
Spst11g00571 903 Gene3D Phosphorylase Kinase; domain 1 563 677 - -
Spst11g00571 903 Gene3D Ribonuclease Inhibitor 19 236 IPR032675 -
Spst11g00571 903 ProSitePatterns Serine/Threonine protein kinases active-site signature. 722 734 IPR008271 GO:0004672|GO:0006468
Spst11g00571 903 Gene3D - 437 543 - -
Spst11g00571 903 Gene3D Tetratricopeptide repeat domain 306 436 IPR011990 GO:0005515
Spst11g00571 903 Gene3D Transferase(Phosphotransferase) domain 1 678 878 - -
Spst11g00571 903 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 17 886 - -
Spst11g00571 903 FunFam Leucine-rich repeat receptor-like protein kinase 571 677 - -
Spst11g00571 903 CDD STKc_IRAK 608 872 - -
Spst11g00571 903 SUPERFAMILY L domain-like 83 215 - -
Spst11g00571 903 NCBIfam pentatricopeptide repeat 378 410 IPR002885 -
Spst11g00571 903 SMART serkin_6 602 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00571 903 Pfam Protein kinase domain 604 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00571 903 SUPERFAMILY Protein kinase-like (PK-like) 583 872 IPR011009 -
Spst11g00571 903 Pfam Malectin domain 441 525 IPR021720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00571 Spst-Chr11 27743875 27760205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00571 411 896 Receptor kinase-like Gene Family AT1G56120 54.080 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst11g00571 Pkinase 7.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00571 - - csin:114280295 729.939