Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00553 ATGGAGACTCACGATAACGCAACGCAGAAGTTCCCTGCAACTGCTGCTGAAAGTTCAACCAGATTTTTGTTTTCTGAGGAGCCCTTTGAGGAGGTTGCGAAAGATTCCAAGAGGATTCTCAATTATCTATTTCGTATTTGCAGCACTAGGTTTGATAACTGGAGCAGGAGGGTTACTCTGATGACTTGTTGCTTTCATCTTTTCAGAAAGAAAGGATCTTCCTCAATCACACGATTGACCGAATTAGATATTGATGTTTCAGAAATTCAGAATGTCAAAATCTACACTTTCAGAGAATTGCGAAGTGCCACTGAATGTTTTAGTCCTGCAAACAAGATTGGGCAGGGAGGTTTTGGAGCAGTCTATAAGGGAAAGCTGAGAAATGGTTCTCTGGTAGCCATAAAGGTTTTATCAGCTGAATCAAGACAAGGGATCCGGGAGTTTTTGACAGAAATCAAGGTGATCTCTAGTATAGAGCACGAGAATCTAGTTAAGTTGCATGGATGTTGTGTGGAAGACAATCACAGGATTTTGGTATATGGCTATCTTGAGAATAACAGCCTAGCACAAACCCTTATTGGTGCAGGCCACAGTAGCATCCAATTCAGTTGGCCTACAAGGAGGAACATTTGTGTAGGTGTTGCCCGGGGTCTTGCATTCCTTCATGAAGAGGTTCGGCCACACATTATCCATAGAGACATAAAAGCAAGCAATGTACTACTTGACAAAGACCTCCAGCCAAAAATTTCAGATTTTGGCCTTGCAAAGCTTATTCCACCAAACCTGACCCATATCAGTACACGTGTTGCTGGAACTGCTGGTTATCTAGCTCCTGAATATGCAATCCGAAATCAAGTGACTAGAAAATCAGATGTTTACAGCTTTGGAATTCTACTACTAGAAATTGTTTGTGGGAGGCCTAATACAAATAGACGTTTACCTGTCGAAGAACAGTATCTTCTCACAAGGGCTTGGGATTTGTATGAGCGTGGGGAAACAGAAAAATTGGTGGATGCTTTTCTGGATGAAGACTTCAATATTGAGGAGGCAATCAGCTTTTGTAAGATTGGTCTCCTTTGCACGCAGGATTCTCCTCAACTCCGGCCCTCTATGTCAACTGTACTTGAAATGCTTTTAGGTGAAAAAGATGTGAATAAGGAGAATGTGACAAAACCAGGCATGATATTTGAATTTGTGGAAGCCAAAAATGCAGGGCAACAAAAAAGCAAGTCTGAAGAGAATAGTAAAACTTTGTTGTCCGAAGGCAAGCAAGATGAATCATCTTCTTCGGGAACCATGAGCTCTTTTCCTACCATGACCTTCACAGCAATATATGATCGAAGCAATTAA 1350 0.4148 METHDNATQKFPATAAESSTRFLFSEEPFEEVAKDSKRILNYLFRICSTRFDNWSRRVTLMTCCFHLFRKKGSSSITRLTELDIDVSEIQNVKIYTFRELRSATECFSPANKIGQGGFGAVYKGKLRNGSLVAIKVLSAESRQGIREFLTEIKVISSIEHENLVKLHGCCVEDNHRILVYGYLENNSLAQTLIGAGHSSIQFSWPTRRNICVGVARGLAFLHEEVRPHIIHRDIKASNVLLDKDLQPKISDFGLAKLIPPNLTHISTRVAGTAGYLAPEYAIRNQVTRKSDVYSFGILLLEIVCGRPNTNRRLPVEEQYLLTRAWDLYERGETEKLVDAFLDEDFNIEEAISFCKIGLLCTQDSPQLRPSMSTVLEMLLGEKDVNKENVTKPGMIFEFVEAKNAGQQKSKSEENSKTLLSEGKQDESSSSGTMSSFPTMTFTAIYDRSN 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00553 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Spst11g00553 449 SMART serkin_6 107 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00553 449 ProSitePatterns Protein kinases ATP-binding region signature. 113 135 IPR017441 GO:0005524
Spst11g00553 449 MobiDBLite consensus disorder prediction 405 436 - -
Spst11g00553 449 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 45 423 - -
Spst11g00553 449 SUPERFAMILY Protein kinase-like (PK-like) 85 378 IPR011009 -
Spst11g00553 449 Pfam Protein kinase domain 110 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00553 449 MobiDBLite consensus disorder prediction 421 436 - -
Spst11g00553 449 Gene3D Phosphorylase Kinase; domain 1 79 182 - -
Spst11g00553 449 MobiDBLite consensus disorder prediction 406 420 - -
Spst11g00553 449 FunFam cold-responsive protein kinase 1 78 182 - -
Spst11g00553 449 Gene3D Transferase(Phosphotransferase) domain 1 183 394 - -
Spst11g00553 449 CDD STKc_IRAK 113 378 - -
Spst11g00553 449 ProSiteProfiles Protein kinase domain profile. 107 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00553 449 FunFam Putative LRR receptor-like serine/threonine-protein kinase 183 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00553 Spst-Chr11 27514481 27525608 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00553 95 381 Receptor kinase-like Gene Family AT1G07650 56.597 8.99e-106 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst11g00553 Pkinase 5.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00553 - - gmx:100801735 701.819