Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00551 ATGGTCTATCTGCATGCTGCATTTTCCCACCACTATGATCACTTCTCTCCATTTCTAATGCCATCACGTGCCATTGCAGTGCCTCAATTCCCTCAAACTTCAGCTCAGAAACCATTAGGTTGGAAAGGGGCTTATGATCGTGCTGCGATCAAGTTCCGTGGGGTTGATGCGGACATCAATTTTAACGTTAGTGACTACGATGAGGATATAAAGCAGGTTGTGAGTACTGAACACTGA 237 0.4515 MVYLHAAFSHHYDHFSPFLMPSRAIAVPQFPQTSAQKPLGWKGAYDRAAIKFRGVDADINFNVSDYDEDIKQVVSTEH 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00551 78 Gene3D AP2/ERF domain 36 64 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00551 Spst-Chr11 27491363 27495751 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00551 44 73 AP2-EREBP Transcription Factor Family AT2G39250 66.667 1.01e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00551 K09284 - gmx:100808212 62.7734