Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00526 ATGGTGAGGCTCAACTTGCTCATGCTTTGCTTATCTGCCTTGTTGTATGCTGTTAATGCATTGAACACTCATGGGGTGGCTCTTCTGTCACTCCAGAGGCATTGGACATTTGTGCCTCCTTCCATAAACTTGAGTTGGAATGCTTCTGATTCCACTCCATGCTCTTGGGTAGGAGTCCAGTGTGACAATAACCATAATGCAATCTTTCTTAATCTCTCTGGATACTCAATTTCAGGTCTTTTGGGACCTGAAATAGGACAATTGAGTCACTTGCAAACACTTGACTTGGCCTCAAACAACTTCTCAGGGAAAATACCTCCTGAGTTAGGAAATTGTAGTCTGCTTGAGAACCTGGACCTTGCTTATAACAATATCAGGGGACACATACCTGAAAGTTTGAAAAACTTGCAGAATTTACTGTATTTCAGCGTTATGTACAATCAGCTAACTGGTCAAATTCCTGATTTTTTGTTTCAACTTCAACACTTGGAACATCTTCTCCTGAACCAAAACCATTTGATTGGTTCCATTCCAACGAATGTTGGGAACAGTACAGAAATTTTGAGGCTGTATCTGGATGCTAATCAGTTGTCAGGAAGGATTCCCCCGTCAATTGGAAACTGCACTAAATTAGTGCAGCTCTATTTGGATAATAACCAGTTGCATGGAGTTCTACCTGAAAGTCTTAACAATCTCCAAAATGTTGTTAAGTTAGGTTTCAGCAATAATAGATTTGAGGGTGCCATTCCATTATTGGGTTCTAGCATATGTAAAAGTTTATATTATTTGGATTTGTCAGTCAATAAGTTTAGTGGAGGCATACCTTCAACCCTGGGCAATTGCAGCGGATTAAGAGAAATTTATGCTTTCAACACAAGTTTAGGAGGCAGCATCCCATCATCCTTGGGCCAACTAAGAGAACTTTCTGTTCTTCGCCTTGAAACCAATCATTTGTCCGGACAAATACCTTCAGAAATAGGTGATTGTAGGTCATTAAAACAGTTGCTGTTAAATAACAATGAACTTGAGGGAGAGATTCCAAGTGAATTAGGAAAGCTAAGTCAATTGCAAGATCTTAGGCTTCATTTCAACCATTTGACTGGAGGAATTCCAGAGAGAATTTGGCAAATTCCTGGCCTTGAGGAGCTGCATGTGTATTACAATAACCTCTCTGGGGAGCTGCCTTTAAAATTGACAGAACTCAAACAACTGAAGAAACTCACCTTGTATCACAATCAATTCTCTGGAATTATTCCTCAAAACTTAGGAATTAATAGCAGTTTAGTCCAGTTGGATGTCTCAAATAATTACTTCACTGGCAACATCCCACCGAATCTTTGCTTTGGACGACAATTAGAAAGGCTAATCCTGGCTTCAAATCAATTTCAAGGTGGTATACCTCTTGACATAGGAAGATGCACATCACTTACCAGGTTACGTCTTGATGGAAACAACTTAAGTGGACCTCTACCTGATTTTACAAGCAATAGTAGTCTCACCTACGTGGACTTCAGTGAGAACAATATCAATGGAACAATTCCATCGAGTTTGGGAAACTGTACAAATCTTACTAGTGTTATTCTGTCTCACAACAATCTTTCTGGAAACATACCCTTTGAGCTAGGAAGCCTTGTTAACCTTCAAAGGCTGAACATTTCTCACAACAAATTAGAAGGTCCTTTGCCACCTGAGCTGTCAAACTGTAAGAAAATGCAATACTTTGATGCCGGATTCAATTCTCTAAATGGCTCATTCCCATCAAGTTTGAGAACTTGGACAGAGTTGACAGCATTAAATGTAAGGGAAAATTATTTCTCTGGTGGTATCCCAACTTTCTTATCAGAATTAGAAGGCCTTTCTGATCTACAACTTGGGGGAAATGTTTTTGGAGGCCAAATTCCTAGATCAATTGGTGAGTTGCACAATCTATTTTATGAGTTGAATCTAAGTGCTAATGAGTTGACTGGTGAAATTCCTCCTGAGATTGGGAAACTGAAACTCCTTCTAAACCTGGATATTTCTCTTAACAATCTGACTGGAAAAATCGAAGTTTTTGAAGATCTCTCTTCATTGATTGCACTCAATATTTCATACAATTCCTTTTCTGGTCCTCTTCCAGACAAACTAGTGAACTTGCTCCATTCTTCTCCATCATCATTCTTGGGTGTTCCTGGCTTATGTGTTAGATGTTTACCATCGAATTGTTCCAAAAGTAAAAGCTTGAAGCCATGTGATGAGAACAATTCCACACATAAAAAAGGGCCGAGTAAAAGGAAAGTTTTGTTGGTAGCACTTGGATCCACCGTACTTGTAACATTTCTTTTACTTGGTCTTGTTTATGTGCTACACTATAAGCAAAATGTCAAGACTTTCCCCGAACAGAGATCATCTACTTTCCTCAAGAAGGTTATGAAGGTCACAGGGAACCTAAATGATAAGCATATTATTGGTAGAGGTGCACATGGAGTTATTTACAAAGTTAAATTCAGTGCAGACCAAGTTTTTGTCATAAAGAAAATTCCTTTTGCAGATAACAAAGCTCAGATCGCAAGCATGACCACAGAGATTGAAACCACTGGGAAGATTAGGCACCGAAATCTGGTAAGAATAAAAAACTTCTGGTTAAGAAAGGACTGTGGTCTAATTCTGTACAAGTACATGGAAAATGGAAGTCTTCATGATGTTCTGCATGAGAAGTATCCACCACCACCTTTAGAGTGGAGTGTCCGCTATAAGATTGCAGTTGGAATTGCACACGGGCTTGAATATCTCCATCATGATTGTGATCCTTTCGTAGTTCACAGAGATATTAAACCAAAGAATATACTTTTGGATTCTGATATGGAGCCTCATATTGCTGATTTTGGCATTGCCAAGCTTCTAGACCATTCCTCCTCCACTTCATCGCAATCTTTCTCTGTTACTGGTACAGTTGGGTACATTGCACCAGAGAATGGTTATTCAACAGTGATAAGTAGGAAGTCTGATGTATATAGTTATGGAGTGGTTTTGCTAGAGCTGATAAGCAGAAAGAAGGTGGTAGATGATCCTTCACTTGTGGAAGGAACAGAACTTGTGGGGTGGGTTACATCTATCTGGGAAAAAACAAAAAGCATTGATGGGATTGTTGACTCAGGCCTTAAAGAGGAACTTTTGGCATCAAATTTGAGGGAGCAAGTTGAACAAGTGCTTTTGATGGCATTGAGATGTACTGAGAAGCATCCTGGTGAGAGACCAACAATGAGAGAAGTGGTGAAGGACTTGATAGTTGGATGCAATGCTCCTCACATGAAGGGCTAG 3300 0.3952 MVRLNLLMLCLSALLYAVNALNTHGVALLSLQRHWTFVPPSINLSWNASDSTPCSWVGVQCDNNHNAIFLNLSGYSISGLLGPEIGQLSHLQTLDLASNNFSGKIPPELGNCSLLENLDLAYNNIRGHIPESLKNLQNLLYFSVMYNQLTGQIPDFLFQLQHLEHLLLNQNHLIGSIPTNVGNSTEILRLYLDANQLSGRIPPSIGNCTKLVQLYLDNNQLHGVLPESLNNLQNVVKLGFSNNRFEGAIPLLGSSICKSLYYLDLSVNKFSGGIPSTLGNCSGLREIYAFNTSLGGSIPSSLGQLRELSVLRLETNHLSGQIPSEIGDCRSLKQLLLNNNELEGEIPSELGKLSQLQDLRLHFNHLTGGIPERIWQIPGLEELHVYYNNLSGELPLKLTELKQLKKLTLYHNQFSGIIPQNLGINSSLVQLDVSNNYFTGNIPPNLCFGRQLERLILASNQFQGGIPLDIGRCTSLTRLRLDGNNLSGPLPDFTSNSSLTYVDFSENNINGTIPSSLGNCTNLTSVILSHNNLSGNIPFELGSLVNLQRLNISHNKLEGPLPPELSNCKKMQYFDAGFNSLNGSFPSSLRTWTELTALNVRENYFSGGIPTFLSELEGLSDLQLGGNVFGGQIPRSIGELHNLFYELNLSANELTGEIPPEIGKLKLLLNLDISLNNLTGKIEVFEDLSSLIALNISYNSFSGPLPDKLVNLLHSSPSSFLGVPGLCVRCLPSNCSKSKSLKPCDENNSTHKKGPSKRKVLLVALGSTVLVTFLLLGLVYVLHYKQNVKTFPEQRSSTFLKKVMKVTGNLNDKHIIGRGAHGVIYKVKFSADQVFVIKKIPFADNKAQIASMTTEIETTGKIRHRNLVRIKNFWLRKDCGLILYKYMENGSLHDVLHEKYPPPPLEWSVRYKIAVGIAHGLEYLHHDCDPFVVHRDIKPKNILLDSDMEPHIADFGIAKLLDHSSSTSSQSFSVTGTVGYIAPENGYSTVISRKSDVYSYGVVLLELISRKKVVDDPSLVEGTELVGWVTSIWEKTKSIDGIVDSGLKEELLASNLREQVEQVLLMALRCTEKHPGERPTMREVVKDLIVGCNAPHMKG 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00526 1099 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Spst11g00526 1099 Gene3D Ribonuclease Inhibitor 22 180 IPR032675 -
Spst11g00526 1099 ProSiteProfiles Protein kinase domain profile. 810 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00526 1099 ProSitePatterns Serine/Threonine protein kinases active-site signature. 932 944 IPR008271 GO:0004672|GO:0006468
Spst11g00526 1099 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 343 1087 - -
Spst11g00526 1099 SUPERFAMILY RNI-like 153 489 - -
Spst11g00526 1099 FunFam Receptor-like protein kinase 7 205 450 - -
Spst11g00526 1099 SMART LRR_typ_2 88 112 IPR003591 -
Spst11g00526 1099 SMART LRR_typ_2 640 665 IPR003591 -
Spst11g00526 1099 SMART LRR_typ_2 353 377 IPR003591 -
Spst11g00526 1099 SMART LRR_typ_2 305 329 IPR003591 -
Spst11g00526 1099 SMART LRR_typ_2 401 425 IPR003591 -
Spst11g00526 1099 SMART LRR_typ_2 544 568 IPR003591 -
Spst11g00526 1099 SMART LRR_typ_2 208 231 IPR003591 -
Spst11g00526 1099 SMART LRR_typ_2 160 184 IPR003591 -
Spst11g00526 1099 Gene3D Ribonuclease Inhibitor 181 253 IPR032675 -
Spst11g00526 1099 Gene3D Ribonuclease Inhibitor 426 495 IPR032675 -
Spst11g00526 1099 Gene3D Ribonuclease Inhibitor 254 425 IPR032675 -
Spst11g00526 1099 SUPERFAMILY L domain-like 36 198 - -
Spst11g00526 1099 Pfam Protein kinase domain 812 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00526 1099 Gene3D Ribonuclease Inhibitor 496 743 IPR032675 -
Spst11g00526 1099 SUPERFAMILY RNI-like 418 715 - -
Spst11g00526 1099 Gene3D Phosphorylase Kinase; domain 1 779 886 - -
Spst11g00526 1099 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 451 736 - -
Spst11g00526 1099 Gene3D Transferase(Phosphotransferase) domain 1 887 1093 - -
Spst11g00526 1099 FunFam Serine/threonine-protein kinase-like protein CCR4 887 1098 - -
Spst11g00526 1099 SUPERFAMILY Protein kinase-like (PK-like) 794 1088 IPR011009 -
Spst11g00526 1099 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 781 886 - -
Spst11g00526 1099 ProSitePatterns Protein kinases ATP-binding region signature. 816 839 IPR017441 GO:0005524
Spst11g00526 1099 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 21 176 - -
Spst11g00526 1099 SMART serkin_6 810 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00526 Spst-Chr11 27206850 27210256 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00526 12 1086 Receptor kinase-like Gene Family AT1G73080 49.588 0.0 986
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Spst11g00526 Pkinase 4.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00526 - - qsu:112010432 1267.29