Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00506 ATGAAGATCTGTGTGGGGATAGCAAGGGGATTGGCTTATCTTCATGAGGAATCAAGGTTGAAAATAGTACACAGGGACATTAAGGCAACCAATGTCTTACTTGACAAGGATCTGAATGCCAAGATCTCTGACTTTGGTTTAGCTAAGCTTGATGAAGAAGAAAATACTCATATCAGTACACGTATAGCTGGAACAATTGGTTACATGGCTCCAGAATATGCTATGAGGGGTTACTTGACTGATAAAGCAGATGTATATAGCTTTGGAGTTGTAGCTTTAGAGATTGTTAGTGGAAAAAGCAACACAAAATACAGGCCAAAGGAAGAGTTTGTATATCTTCTAGATTGGGCTTATGTTCTCCAAGAGCAAGGAAACCTTCTGGAATTGGTGGATCCAAGTCTTGGTTCAAAGCACTCTCCAGAGGAAGCCATGAGAATGCTGAGCTTGGCACTCTTATGCACCAATCCATCTCCCACTCTTAGACCAACCATGTCTTCTGTGGTGAGCATGCTTGAAGGAAAAATTCCAATCCAAGCACCGATAATCAAGCGCAGTGAGAGCAACCAAGATATAAGATTTAAAGCCTTTGAGTTGCTATCACAAGACAGCCAAACTCTTGTTTCATCTGCACACTCAGAAGAAAGTATGAAGCAACGACACAAATCAGAAGATGGACCATGGATTGATTCCTCCATATCTCTTCCAAGTGGAGATGATTATGCTTCAAGCAGCAAACTAATTTAA 744 0.4099 MKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTKYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLGSKHSPEEAMRMLSLALLCTNPSPTLRPTMSSVVSMLEGKIPIQAPIIKRSESNQDIRFKAFELLSQDSQTLVSSAHSEESMKQRHKSEDGPWIDSSISLPSGDDYASSSKLI 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00506 247 ProSitePatterns Serine/Threonine protein kinases active-site signature. 22 34 IPR008271 GO:0004672|GO:0006468
Spst11g00506 247 Gene3D Transferase(Phosphotransferase) domain 1 1 196 - -
Spst11g00506 247 Pfam Protein tyrosine and serine/threonine kinase 2 171 IPR001245 GO:0004672|GO:0006468
Spst11g00506 247 SUPERFAMILY Protein kinase-like (PK-like) 2 172 IPR011009 -
Spst11g00506 247 FunFam Putative LRR receptor-like serine/threonine-protein kinase 1 183 - -
Spst11g00506 247 MobiDBLite consensus disorder prediction 207 247 - -
Spst11g00506 247 SMART serkin_6 1 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00506 247 ProSiteProfiles Protein kinase domain profile. 1 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00506 247 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00506 Spst-Chr11 26844157 26845309 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00506 2 238 Receptor kinase-like Gene Family AT1G53430 76.250 2.35e-124 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst11g00506 PK_Tyr_Ser-Thr 9.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00506 - - gmx:100817368 476.478