Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00495 ATGCCTGGGAACAAGTACAACGGAAACTCGAATGGAATTCCGGGGCGGGTGGAACGACTTCTGAGGGAGAGAGAGTTGAGGAAGAGTGGGAGGGTGAGTCAGTTGAAGGAGGGGAGTGAGAGCAATGGAAACAGTGGTGAGGGTTTTGAGAAGGAGAAGGTGCGTTTGAGGGAAGAAGAGAGTTACACGGGTGATGGTGTTGAACCGGGTAGGGTGAGGAAGGGAGAGGGAGAGGAGAAGCATGAAACGAAGACGTTTAGACAGAGGCTGTTGGTGGTGGCGAATAGGTTGCCGGTGTCGGCAGTGAGGAAAGGCGAGGACGCGTGGTCATTGGAGATAAGTGCCGGTGGACTCGTCAGCGCCCTGTTAGGTGTGAAGGAGTTTGAGGCAAAGTGGATAGGTTGGGCCGGAGTGAATGTGCCAGATGAGATTGGACAGAAGGCACTCACTAAAGCGTTGGCTGAAAAGCGGTGCATCCCTGTATTTCTTGATGAAGAGATTGTTCATCAGTATTATAATGGCTACTGCAACAATATATTGTGGCCGCTTTTCCACTACCTCGGACTCCCACAAGAAGATCGCCTGGCCACCACGCGCAGTTTTCAGTCTCAATTTGAGGCATATGAGAAAGCAAATCAGATGTTTGCTGATGTTGTAAACAAGCACTATGAAGAGGGTGATGTCGTTTGGTGCCATGATTACCATCTCATGTTCCTTCCAAAATGCCTAAAGAAACATAACAAGAATATGAAAGTAGGATGGTTTCTCCACACCCCTTTCCCATCTTCTGAAATTCACAGGACACTGCCATCTCGTTCAGAGCTCCTGCATTCCGTTCTCGCTGCTGATTTAGTTGGTTTTCACACCTACGATTATGCAAGACATTTTGTTAGTGCCTGTACTCGCATCCTTGGACTTGAAGGTACACCTTACGGGGTTGAGTATCAAGGGAAGCTAACTCGTGTTGCTGCGTTTCCAATCGGGATAGACTCAGAGCGCTTTATACGAGCTCTTGACCTTCCTCCAGTACAAGATCACATCAGAGAATTACAAGAAAGATTTAAAGGCAGAAAGGTAATGTTAGGTGTCGATCGCTTAGATATGATTAAAGGAATCCCTCAGAAAATTCTAGCATTTGAAAAATTTCTGGAAGAAGATGCTTATTGGCGTGATAAAGTTGTTTTGCTACAAATCGCTGTCCCGACAAGAACAGATGTTCCTGAGTATCAAAAGCTTACAAGCCAGGTTCATGAAATAGTTGGGCGCATCAATGGCAGATTTGGAACATTGACCACTGTTCCTATACATCATTTGGATCGCTCACTTGACTTTCATCAACTATGTGCTTTGTATGCTGTTACTGATGTAGCACTAGTCACATCTTTGAGGGATGGAATGAATCTTGTCAGCTATGAATATGTGGCCTGCCAGGAGAAAAAGAAAGGGGTTCTCATTCTTAGTGAATTTGCTGGTGCAGCACAGTCTCTTGGTGCCGGGGCCATTCTTGTCAACCCCTGGAACATTACGGAAGTTGCTGCTGCAATTGCCAGGGCTCTGAAGATGCCATCTGCAGAAAGAGAAAAGAGACATAAGCATAATTTTCTTCATGTAAAATCCCACACTGCTCAAGAATGGGCAGGAACTTTCGTAAGTGAACTAAATGATACTGTTATTGAGGCACAACTAAGGACAAGACAAGGTCCACCCCCGCTTCCAACCAAGACTGCAATTGAAAGTTATCAGCAATCAACTAATCGATTGCTCATTTTGTTTTATGCAAGGCATACTGAAATGGGTCAAGATGATAACAAAATTGCCGGAACTCTTGGATTCAGTGAAATTGTATCGAGCTTCATCCAGAAGCTTGTGGGAGGTTATATGGAAGAAGAGGTGAAGCCAAAAAGCCTACTATTCTATTTCCGATCTTTGACAGAACTGACCTTAGAGCTAGGTTTAACCAACATCGAACAAAAGGGATTCAGTGGAACTTTAACTGAACCAGTCGAGAAAACAGGCGATCAGATTAAAGAAATGGAACTTAAGGTGCATCCAAAATTGAAACAACCCTTGACAGAGCTATGCAGTGATCCAAATACCACAGTTGTTGTGCTCAGTGGAAGCGGTAGACAAGTCCTAGATGATAACTTCAAAGAATATGACATGTGGTTGGCGGCTGAGAATGGAATGTTTTTACATCCTTCAAAGGGTGAGTGGATGACAACAATGCCAGAGCATCTGAATATAGAATGGCTTGATAGTGTGAAGCATGTTTTTGAGTACTTCACGGAAAGAACACCTCGGTCACATTTTGATTTTGAAGAAAGAGAAACATCACTTGTATGGAATTACAAATATGCAGATGTTGAGTTTGGAAAACTTCAAGCAAGGGACATGCTGCAGCATCTCTGGACGGGTCCAATTTCTAATGCATCAGTTGAAGTTGTTCAAGGGAGCCGATCTGTTGAGGTGCGAGCTGTTGGTGTTACCAAGGGAGCAGCCATTGACCGCATCTTGGGTGAGATAGTGCACAGTAAATCCATGACATCACCAATTGATTATGTTCTATGCATAGGACATTTTCTGGCGAAGGATGAAGATATTTATTCATTTTTCGAGCCAGATCTTCCCTCTATTGGAGTGGGTCTTCCACGAAGCAAGGTAGCAACAGATGGAGTTAAGTTTTCTGTTGAAAGGAAACCATCTTTGACGGTCCCAGCAACTAAGAGTGGACCAAAGTCATCTCAAACTAAGACAGCACGACCAGTGTCAAATTCTGAGAAGAAAACAAACAACCATATCTGCCCTACACAACGAAGGCCAGCACCTGAAAAGGTTTCATGTAACGTCCTTGACCTTAAGAAAGAGAATTACTTCTCTTGTGCCGTTGGACGAACCCGAACAAATGCTCGGTATACGCTTGATTCATCGGACGATGTTGTTTCATTTCTGAAGGAACTAGCTGGTGCTTCTTCCCGAATTTACCACTGA 2988 0.4431 MPGNKYNGNSNGIPGRVERLLRERELRKSGRVSQLKEGSESNGNSGEGFEKEKVRLREEESYTGDGVEPGRVRKGEGEEKHETKTFRQRLLVVANRLPVSAVRKGEDAWSLEISAGGLVSALLGVKEFEAKWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFEAYEKANQMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKKHNKNMKVGWFLHTPFPSSEIHRTLPSRSELLHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPYGVEYQGKLTRVAAFPIGIDSERFIRALDLPPVQDHIRELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEEDAYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTTVPIHHLDRSLDFHQLCALYAVTDVALVTSLRDGMNLVSYEYVACQEKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIARALKMPSAEREKRHKHNFLHVKSHTAQEWAGTFVSELNDTVIEAQLRTRQGPPPLPTKTAIESYQQSTNRLLILFYARHTEMGQDDNKIAGTLGFSEIVSSFIQKLVGGYMEEEVKPKSLLFYFRSLTELTLELGLTNIEQKGFSGTLTEPVEKTGDQIKEMELKVHPKLKQPLTELCSDPNTTVVVLSGSGRQVLDDNFKEYDMWLAAENGMFLHPSKGEWMTTMPEHLNIEWLDSVKHVFEYFTERTPRSHFDFEERETSLVWNYKYADVEFGKLQARDMLQHLWTGPISNASVEVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMTSPIDYVLCIGHFLAKDEDIYSFFEPDLPSIGVGLPRSKVATDGVKFSVERKPSLTVPATKSGPKSSQTKTARPVSNSEKKTNNHICPTQRRPAPEKVSCNVLDLKKENYFSCAVGRTRTNARYTLDSSDDVVSFLKELAGASSRIYH 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00495 995 MobiDBLite consensus disorder prediction 46 80 - -
Spst11g00495 995 SUPERFAMILY HAD-like 662 987 IPR036412 -
Spst11g00495 995 Gene3D Glycogen Phosphorylase B; 336 539 - -
Spst11g00495 995 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 88 556 - -
Spst11g00495 995 Gene3D - 677 882 IPR023214 -
Spst11g00495 995 Pfam Glycosyltransferase family 20 89 554 IPR001830 GO:0003824|GO:0005992
Spst11g00495 995 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 80 987 IPR001830 GO:0003824|GO:0005992
Spst11g00495 995 MobiDBLite consensus disorder prediction 906 936 - -
Spst11g00495 995 CDD HAD_TPP 659 888 - -
Spst11g00495 995 CDD GT20_TPS 89 554 IPR001830 GO:0003824|GO:0005992
Spst11g00495 995 Gene3D Glycogen Phosphorylase B; 80 335 - -
Spst11g00495 995 Gene3D - 744 826 - -
Spst11g00495 995 MobiDBLite consensus disorder prediction 1 80 - -
Spst11g00495 995 MobiDBLite consensus disorder prediction 17 34 - -
Spst11g00495 995 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 89 554 IPR012766 GO:0003825|GO:0005992
Spst11g00495 995 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 744 826 - -
Spst11g00495 995 FunFam Alpha,alpha-trehalose-phosphate synthase 678 747 - -
Spst11g00495 995 Pfam Trehalose-phosphatase 677 888 IPR003337 GO:0003824|GO:0005992
Spst11g00495 995 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 336 538 - -
Spst11g00495 995 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 81 335 - -
Spst11g00495 995 MobiDBLite consensus disorder prediction 900 939 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00495 Spst-Chr11 26746506 26763679 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00495 1 991 Trehalose Biosynthesis Gene Families AT1G78580 66.931 0.0 1298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00495 K16055 - rvl:131331465 1359.74