Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00489 ATGGAGTGCAACATCTGCCCTCGTGGCACAGAGGGGAGCAGGGACGCGGCGGGGATGGACGTGGAGGTGCTGAAGTTGCTAGCGGTAGGCAGCTACGGGCGAGTGTTCCAATGCCGTGACCTGGAGACCGGTGCACTCGTGGCCATGAAACAGATCAGGATAATGGGCACATGGCAGGGTGTTCCGGCTCCGAGCATCCGTGAAGTGTCGTTTCTCATGGAACTCGACCACAACAACATCGTCAAGTTGCTCAAAGTGGGAATCTCGGATAAAAGATATGTCAATCTCGTCTTCGAGCATCTCGACTGCGACCTTCATGACTATATTCAGAGCAGTCCTTTTCCCAGGGATGCCTTGACCATAAAGAGTTTCATGTACCAGATGCTCTCTGCCGTGGAGTTCTGTCATTCCCGTAAGATTCTGCATAGAGATTTGAAACCAAAGAATGTGCTGATGGATCAATCTAGAAGGTTGATCAAGCTGGCTGATTTTGGTTTGGCTAGAGAGTGTAGAGATGACATATTATATACTGAGAAGTTAGGAACTGCCTGGTACAGGGCACCTGAAATCTTGTGTGACGACCAACGATATTCGACTCCAGTTGATGTGTGGGCTGCTGGCTGTATATTTGCTGAAATGGTAACTGGACAACCTTTATTCCAAGCTATTAATTCTCGGGATGAGTTGGAGGCAATTTTCAGACTTTTAGGTACCCCCACAGAGGAAACATGGTCAGGAATCACTGAATTATTGCCTAATCTTCATCTCTACCCGAATTTTGATCCACTGGGTTTGGAAGTACTTGTTCTTGGTCTGGATCGTAATGGCCTGAATCTTCTATCAAGAATGCTTTGCATGGACCCAAGGAAAAGGATTTCTGCTGCAGCTGCTCTACACCATGCTTACTTTAAAGAAGTGAATTTGATTTTGGGAGAAAAAACCAATTGA 948 0.4684 MECNICPRGTEGSRDAAGMDVEVLKLLAVGSYGRVFQCRDLETGALVAMKQIRIMGTWQGVPAPSIREVSFLMELDHNNIVKLLKVGISDKRYVNLVFEHLDCDLHDYIQSSPFPRDALTIKSFMYQMLSAVEFCHSRKILHRDLKPKNVLMDQSRRLIKLADFGLARECRDDILYTEKLGTAWYRAPEILCDDQRYSTPVDVWAAGCIFAEMVTGQPLFQAINSRDELEAIFRLLGTPTEETWSGITELLPNLHLYPNFDPLGLEVLVLGLDRNGLNLLSRMLCMDPRKRISAAAALHHAYFKEVNLILGEKTN 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00489 315 Pfam Protein kinase domain 23 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00489 315 ProSiteProfiles Protein kinase domain profile. 21 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00489 315 PANTHER CELL DIVISION PROTEIN KINASE 23 305 - -
Spst11g00489 315 SUPERFAMILY Protein kinase-like (PK-like) 22 307 IPR011009 -
Spst11g00489 315 Gene3D Phosphorylase Kinase; domain 1 21 101 - -
Spst11g00489 315 Gene3D Transferase(Phosphotransferase) domain 1 103 313 - -
Spst11g00489 315 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Spst11g00489 315 FunFam CMGC family protein kinase 103 308 - -
Spst11g00489 315 SMART serkin_6 21 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00489 Spst-Chr11 26698277 26702610 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00489 22 306 Core Cell Cycle Gene Families AT3G48750 48.084 2.23e-94 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Spst11g00489 Pkinase 5.4e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00489 K02206 - gmx:100810997 430.254