Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00487 ATGGGACGGTGCATGTCGCATGATTTCGCTTTTACACTTGCTGCGTTGTTCTGTCTCTCCGGTTGCTTGGTTAACGTTGGACAAGCACAGTCTACGAACGCCACCACTGATCCTTCTGAAGCAAGAACTTTAAATTCAATCTTCAGCAAATGGGGTAAATCGGCAGATACAACTATATGGAATATAAGCGGTGAAGTATGCAGTGGAAGAGCCATCGATAGTACCACCACCATTGACTCTTACAACCCATTCATCAAATGTGACTGTTCCTTTGACAACAGAACTACTTGCCGCATCACATCACTGAGGGTCTATGCATTGGACGTGGTTGGTGAAATTCCAGAAGAGATATGGACTCTCACTTTCCTCACCAATTTAATTCTTGGGCAAAATTACTTGACGGGTTCTCTACCTCCAACTATTGGAAATCTAACTCGTTTGGAATACTTGAGTCTTGGAATCAACAATTTATCAGGGGAGCTTCCAAAGGAATTGGGAAATCTTACAGAGTTGAAATTACTGAGCATTGGGTCAAACAAGTTCTCAGGACCTCTCCCATCTGAACTTGGAAAACTCACAAAGTTAGATCAACTCTACTTTGATAGTTCCGGAATTAGTGGTCCAATTCCGTCCTCATTTGCAGACCTTAGGAATTTGGTAACAGTATGGGCTTCAGACACGGAACTCACAGGCAAAATACCAGACTTCATAGGGAATTGGACTAAACTTCAAGTCTTGAAGTTTCAAGGCAATTCTTTTAATGGCTCAATACCCTCATCATTTTCCTATTTGACTTCTTTAACAGAATTGAGAATAAGTGGTTTATCTAATGGGAGCTCCTCGCTGGAATTTGTAAGGAGTATGAAATCTTTGACTATGTTAGAATTGAGGAATAACAATATTTCTGCTTCGATTCCATCCTTCATTGGCGAGTTGCACAATTTGACCCTGCTAGACTTGTCATACAATGATCTATCAGGTAGCCTCCCCTCATGGGCAAATGAACCAAATTTACAACTGAATTTAGTTGCCAACAACTTGTCGATAGCTGATGATTCAAGTACCAGCGGATTGCCATTTGGGCTCAACTGTCTCCAGAAAAACTTCCCTTGCAATCGAGGTGCTGGAAGATATTCTGACTTTGCAATCAAGTGTGGCGGTAACCAAATTAGGTCCACAGATGGAATCGTATATGAAAGGGAGAATGAGACACTTGGTCCTGCTACATACTATGTTACTGATACAAGTAGATGGGCTGTTAGTAATGTTGGATTATTTACGGGGAGTAGTAATCCAATATACACGCGTTTTGTGTCTAATCAATTCACTAACACCATGAATACGGAGCTCTTCCAAACAGCACGACTCTCTCCTTCATCATTAAGATATTATGGCTTGGGGCTGGAAAATGGCTTTTACAACATCACCCTTCAATTTGCAGAAACAGCTATTCTGGATTCTACTACAACATGGAAAAGTCTTGGGAGACGAGTCTTTGATATATATATACAGGGGACTCTTGTTTTGAAAGATTTTGACATACAAAAGGAAGCTGGGGGCATCTCATACAGAGCTGTCCAAAAGCAATTTAGGTTTCAAGTGTCAGAAAACTATCTTGAAATCCATCTCTTTTGGGCTGGAAAAGGGACTTGTTGCATACCAGATCAAGCTACTTATGGGCCCTTGATTCAAGCCATCCATGCTATCCCAGATTTTATACCTACTGTCAGTAACGAACCTCCAAGCACTAAAAATAATAGAACAGGCCTAATTGTCGGAGTTGTTGTTGGAGTTGGAGTTGTAAGCTTTCTCTCAGTGTTCGTGATTTTCTGTATCATTCGGAGAAGAAAACGCCAGCATGAGGATGAAGAGCTTTTAGGAATTGATACAAAGCCATACACTTTCAGTTATTCTGAGTTGAAGAATGCTACAAATGACTTTAATATCGAAAATAAGCTTGGAGAGGGAGGTTTTGGACCTGTTTATAAGGGAACACTTAATGATGGAAGAGTTATTGCTGTGAAACAACTATCAGTAGCATCCCATCAAGGAAAGAGCCAGTTCATAACTGAGATTGCTACTATATCAGCTGTACAACATCGTAATCTGGTCAAACTATATGGATGTTGCATTGAGGGAAGTAAAAAACTTCTTGTGTACGAGTATCTAGAGAACAAGAGTCTTGATCAAGGATTATTTGGAAATTGTTTAACCCTCAATTGGTCCACACGCTATGATATCTGCTTGGGTGTTGCTAGAGGTTTAGCTTATTTACATGAAGAGTCACGTCTCCGTATTGTACACCGTGATGTGAAGGCTAGTAACATTTTACTTGATTATGAGCTTGTCCCCAAAATTTCTGATTTTGGGTTGGCCAAATTGTATGATGATAAAAAGACCCATATAAGCACCCGTGTGGCTGGGACAATTGGATATCTTGCACCGGAGTATGCCATGCGTGGACACCTTACAGAGAAAGCAGATATATTTTCATTTGGTGTTGTTGCTCTAGAGTTAGTTAGTGGAAGGCCAAATTCTGATTCAAGTTTAGAAGGAGAGAAGGTGTATCTTTTAGAATGGGCTTGGCAGCTTCATGAAAACGACCGCATAATTGATCTGGTGGACCCTAGACTTTCAGAATTCAATGAGGAAGAAGTTAAACGTATTGTGGGAATAGCACTTTTGTGCACTCAGACATCACCCACTTTAAGACCATCAATGTCACGTGTGGTGGCAATGCTTTCAGGAGATATTGAAGTGAGCTCTATCACTGCAAAGCCAGGATACCTTACTGACTGGAGATTTGATGATGTGTCCAGCTTCATGACTGACAATGAAATCAAAGGATTAAATACAAGTTACCAGAATTCATCAGGAAGTACCAGCATGGTGGGTGGTGCAGACCATTCACCAATAAGTGTTTCTAAACCGATCCTTAATGAGACTCTTAGTGAGGATGTTCTGGGATTTAGTGCGTGA 2979 0.4075 MGRCMSHDFAFTLAALFCLSGCLVNVGQAQSTNATTDPSEARTLNSIFSKWGKSADTTIWNISGEVCSGRAIDSTTTIDSYNPFIKCDCSFDNRTTCRITSLRVYALDVVGEIPEEIWTLTFLTNLILGQNYLTGSLPPTIGNLTRLEYLSLGINNLSGELPKELGNLTELKLLSIGSNKFSGPLPSELGKLTKLDQLYFDSSGISGPIPSSFADLRNLVTVWASDTELTGKIPDFIGNWTKLQVLKFQGNSFNGSIPSSFSYLTSLTELRISGLSNGSSSLEFVRSMKSLTMLELRNNNISASIPSFIGELHNLTLLDLSYNDLSGSLPSWANEPNLQLNLVANNLSIADDSSTSGLPFGLNCLQKNFPCNRGAGRYSDFAIKCGGNQIRSTDGIVYERENETLGPATYYVTDTSRWAVSNVGLFTGSSNPIYTRFVSNQFTNTMNTELFQTARLSPSSLRYYGLGLENGFYNITLQFAETAILDSTTTWKSLGRRVFDIYIQGTLVLKDFDIQKEAGGISYRAVQKQFRFQVSENYLEIHLFWAGKGTCCIPDQATYGPLIQAIHAIPDFIPTVSNEPPSTKNNRTGLIVGVVVGVGVVSFLSVFVIFCIIRRRKRQHEDEELLGIDTKPYTFSYSELKNATNDFNIENKLGEGGFGPVYKGTLNDGRVIAVKQLSVASHQGKSQFITEIATISAVQHRNLVKLYGCCIEGSKKLLVYEYLENKSLDQGLFGNCLTLNWSTRYDICLGVARGLAYLHEESRLRIVHRDVKASNILLDYELVPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADIFSFGVVALELVSGRPNSDSSLEGEKVYLLEWAWQLHENDRIIDLVDPRLSEFNEEEVKRIVGIALLCTQTSPTLRPSMSRVVAMLSGDIEVSSITAKPGYLTDWRFDDVSSFMTDNEIKGLNTSYQNSSGSTSMVGGADHSPISVSKPILNETLSEDVLGFSA 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00487 992 Gene3D Transferase(Phosphotransferase) domain 1 723 925 - -
Spst11g00487 992 Gene3D Ribonuclease Inhibitor 37 273 IPR032675 -
Spst11g00487 992 SMART serkin_6 647 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00487 992 FunFam Leucine-rich repeat receptor-like protein kinase 378 570 - -
Spst11g00487 992 ProSitePatterns Serine/Threonine protein kinases active-site signature. 766 778 IPR008271 GO:0004672|GO:0006468
Spst11g00487 992 ProSiteProfiles Protein kinase domain profile. 647 920 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00487 992 Gene3D - 380 570 - -
Spst11g00487 992 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 19 945 - -
Spst11g00487 992 SUPERFAMILY Protein kinase-like (PK-like) 630 932 IPR011009 -
Spst11g00487 992 FunFam Putative LRR receptor-like serine/threonine-protein kinase 723 926 - -
Spst11g00487 992 FunFam Leucine-rich repeat receptor-like protein kinase 616 722 - -
Spst11g00487 992 CDD STKc_IRAK 653 914 - -
Spst11g00487 992 SUPERFAMILY L domain-like 74 346 - -
Spst11g00487 992 Gene3D Ribonuclease Inhibitor 274 374 IPR032675 -
Spst11g00487 992 Pfam Malectin domain 380 566 IPR021720 -
Spst11g00487 992 Pfam Protein tyrosine and serine/threonine kinase 648 914 IPR001245 GO:0004672|GO:0006468
Spst11g00487 992 FunFam Os05g0263100 protein 41 277 - -
Spst11g00487 992 Gene3D Phosphorylase Kinase; domain 1 609 722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00487 Spst-Chr11 26662747 26679975 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00487 147 985 Receptor kinase-like Gene Family AT1G56120 59.888 0.0 1056
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst11g00487 PK_Tyr_Ser-Thr 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00487 - - gmx:100798233 1427.92