Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00485 ATGAAGCAGCTGATTCGCAAGCTCTCGCGCGTCGGCCACTCCTCGCAGTACACGCTCCTCCGTTCCGAGTCACGGCGTGCGGTGTCGCTCCGCCGAAACCGGGATGTGGAGGTGCCGGTGGGGCACGTACCGGTGTACGTGGGAGAGGAGATGGAGCGGTTCGAGGTGAGCGCGGAGCTGCTGAACCACCCGGTTTTCGTGAAGCTCCTGAACCGGTCCGCGCAGGTGTACGGGTACGCGCAGAAGGGGGTGCTCCGGATACCCTGCCACGTCATCGTCTTCCAGCGAGTCCTCGAAGCGCTTCAACTCGGTCACCACTCGCTCCAAGACATCCACGACCTCCTCACCTCCTCTTTCCAAGACTTCTCCTAG 372 0.629 MKQLIRKLSRVGHSSQYTLLRSESRRAVSLRRNRDVEVPVGHVPVYVGEEMERFEVSAELLNHPVFVKLLNRSAQVYGYAQKGVLRIPCHVIVFQRVLEALQLGHHSLQDIHDLLTSSFQDFS 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00485 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 25 97 IPR003676 GO:0009733
Spst11g00485 123 Pfam Auxin responsive protein 13 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00485 Spst-Chr11 26612468 26612839 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00485 37 112 Calmodulin-binding Proteins AT5G20810 36.842 1.36e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00485 K14488 - cave:132175866 159.458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00485 11 26612468 26612839 Spst11g00485 11 26612468 26612839 ECH
Spst5g01693 5 52082360 52082773 Spst11g00485 11 26612468 26612839 PCT